Job Description P08957 Confidence 99.07% Date Thu Jan 5 11:01:44 GMT 2012 Rank 73 Aligned Residues 127 % Identity 17% Template c2pwyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:trna (adenine-n(1)-)-methyltransferase; PDBTitle: crystal structure of a m1a58 trna methyltransferase Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	A	G	Q	Y	F	T	P	R	P	L	I	K	T	I	I	H	L	L	K	P	Q	P	R	E	V	V	Q	D	P	A	A	G	T	A	G	F	L	I	E	A	D	R	Y	V	K	S	Q	T	N	D	L	D	D	L	D	G	D	T	Q	D	F	Q	I	H	R	A	F	I	G	L	E	L	V	P	G	T	R	R
Query Conservation
Alig confidence															.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	S	A	T	P	T	Y	P	K	D	A	S	.	A	M	V	T	L	L	D	L	A	P	G	M	R	V	L	E	A	G	T	G	S	G	G	L	T	L	F	L	A	R	A	V	G	E	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	E	S	Y	E	A	R	P	H	H	L	A
Template Known Secondary structure				S	S										.						T	T			T	T									T	T	S											T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure															.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																		120	.	.	.	.	.	.	.	.	.	130	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	L	M	N	C	L	L	H	D	I	E	G	N	L	D	H	G	G	A	I	R	L	G	N	T	L	G	S	D	G	E	N	L	P	K	A	H	I	V	A	T	N	P	P	F	G	S	A	A	G	T	N	I	T	R	T	F	V	H	P	T	S	N	K	Q	L	C	F	M	Q	H	I	I	E	T	L	H	P	G
Query Conservation
Alig confidence																	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	E	R	N	V	R	A	F	W	Q	V	E	N	V	.	.	.	.	.	R	F	H	L	G	K	L	E	E	A	E	L	E	E	A	A	Y	D	G	V	A	L	D	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	W	K	V	L	E	K	A	A	L	A	L	K	P	D
Template Known Secondary structure																	.	.	.	.	.					S		G	G	G					T	T									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G
Template Predicted Secondary structure																	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.																				.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	A	A	V	V	V	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	L	V	A	Y	L	P	N
Template Known Secondary structure									S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions