 |
Job Description | P31991 | Confidence | 1.86% | Date | Thu Jan 5 11:48:56 GMT 2012 |
Rank | 89 | Aligned Residues | 49 |
% Identity | 16% | Template | c2v3mF_ |
PDB info |
PDB header:ribosomal protein | Chain: F: PDB Molecule:naf1; |
PDBTitle: structure of the gar1 domain of naf1
|
Resolution | 2.74 Å |
|
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  | . | . |
|
|
|
|
|  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | I | M | V | N | N | Y | R | T | H | C | G | V | V | D | I | N | L | N | F | F | N | D | I | L | Y | S | V | R | L | K | N | I | S | K | . |
. |
L | E | N | M | E | F | C | A | T | K | Q | R | V | Y |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|
|   |   |
|
|   |
|   |
|
|
|
|   |
|   |   |
|   |
|   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
Template Sequence |   |
S | I | F | C | L | E | D | R | T | L | I | G | X | L | T | E | V | F | G | P | L | Q | N | P | F | Y | R | I | K | L | P | D | S | K | K | N | L | F | D | E | L | K | V | R | L | G | E | K | A | F | I |
Template Known Secondary structure |   |
|  |  |  |  | T | T |
|
|  |  |  |  |
|
|  |  |  | S |
| S | S | S |
|  |  |  |  |  |
|
| G | G | G |  |  |  |  |  |  |  |  | T | T | T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|