|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | |
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|  |  | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
M | D | I | I | S | V | A | L | K | R | H | S | T | . |
. |
K | A | F | D | A | S | K | K | L | T | P | E | Q | A | E | Q | I | K | T | L | L | Q | Y | S | P | S | S | T | N | S | Q | P | W | H | F | I | V | A | S | T | E | E | G | K | A | R | V | A | K | S | A | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G |
Query Conservation |   |
|   |   |   |   |   |
|   |   |
|
|
|   | . | . |
|   |
|   |   |
|   |
|
|   |   |
|   |
|   |   |
|
|   |
|
|   |   |
|
|
|   |   |
|   |
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
|   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|   |
| . |   |   |   |   |
|   |   |
|   |
|   |   |
|
|
|
|
|   |   |
|
|
|   |   |
|   |
|
|   |   |   |   |
|
|   |   |   |   | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | K | L | L | D | Y | L | R | V | R | R | S | T | P | A | L | Q | L | . |
S | E | P | G | P | S | K | G | E | I | E | E | I | L | R | L | A | V | R | V | P | D | H | G | K | L | A | P | W | R | F | V | V | Y | R | G | E | E | . |
R | V | R | L | S | E | A | A | L | R | I | A | L | E | K | N | P | D | L | D | L | Q |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
| G | G | G |
| . | B | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
| G | G | G |
|
|
|  |  |  |  |  |  |
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
|
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | Y | V | F | N | E | R | K | M | L | D | A | S | H | V | V | V | F | C | A | K | T | A | M | D | D | V | W | L | K | L | V | V | D | Q | E | D | A | D | G | H | F | A | T | P | E | A | K | A | A | N | D | K | G | R | K | F | F | A | D | M | H | R | K | D | L | H | D | D | A | E | W | M | A | K | Q | V | Y | L | N |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
Template Sequence |   |
Q | Q | E | A | E | R | T | R | F | T | R | A | P | V | V | I | A | V | I | S | T | A | K | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | F | K | I | P | E | W | E | Q | V | X | S | A | G | A | V |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | T | T | S | S | S | S |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
  |
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | |
|
. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | N | F | L | L | G | V | A | A | L | G | L | D | A | V | P | I | E | G | . |
. |
F | D | A | A | I | L | D | A | E | F | G | L | K | E | K | G | Y | T | S | L | V | V | V | P | V | G | H | H | S | V | E | D | F | N | A | T | L | P | K | S | R | L | P | Q | N | I | T | L | T | E | V |
Query Conservation |   |
  |
|   |
|   |
|
|
|   |
|
|
|
|
|
|   |   |
|   |   | . | . |   |   |   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |   | . |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   | . | . | . | . |   |   |   |   |   |
|   |   |   |   |
|   |
|   |
|   |
Template Sequence |   |
C | L | N | V | I | F | A | A | N | A | S | G | F | A | A | N | W | L | T | E | W | L | A | F | D | P | A | F | L | A | E | I | G | V | S | A | E | . |
E | K | V | A | G | Y | I | H | I | G | S | T | T | F | P | . |
. |
. |
. |
P | V | E | R | P | R | P | E | L | A | D | V | V | T | W | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |
|
| G | G | G | T |
|  |  |  |  |  |  |  | T |
|
| S | S | . |
|  |  |  |  |  |  |  |  |  | B |
| S | S |
| . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
|
|
|
. | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
  |