Job Description F2X7N5 Confidence 99.96% Date Thu Jan 5 10:56:28 GMT 2012 Rank 42 Aligned Residues 159 % Identity 13% Template c3bm2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:protein ydja; PDBTitle: crystal structure of a minimal nitroreductase ydja from escherichia2 coli k12 with and without fmn cofactor Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	I	S	V	A	L	K	R	H	S	T	K	A	F	D	A	S	K	K	L	T	P	E	Q	A	E	Q	I	K	T	L	L	Q	Y	S	P	S	S	T	N	S	Q	P	W	H	F	I	V	A	S	T	E	E	G	K	A	R	V	A	K	S	A	A	G	N	Y	V	F	N	E	R	K	M	L	D	A	S	H	V
Query Conservation
Alig confidence																	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	L	E	L	L	I	N	R	R	S	A	S	R	L	.	A	E	P	A	P	T	G	E	Q	L	Q	N	I	L	R	A	G	X	R	A	P	D	W	H	F	F	V	I	E	G	E	G	R	E	R	F	S	A	V	L	E	Q	G	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			G	G	G	G	G	S						S			.		S					T												S											T	T															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	F	C	A	K	T	A	M	D	D	V	W	L	K	L	V	V	D	Q	E	D	A	D	G	H	F	A	T	P	E	A	K	A	A	N	D	K	G	R	K	F	F	A	D	M	H	R	K	D	L	H	D	D	A	E	W	M	A	K	Q	V	Y	L	N	V	G	N	F	L	L	G	V	A	A	L	G	L	D	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	G	S	D	D	K	A	I	D	K	A	R	N	A	P	F	R	A	P	L	I	I	T	V	V	A	K	V	P	R	W	E	Q	E	X	S	A	G	C	A	V	X	A	X	Q	X	A	A	V	A	Q	G	F	G	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T												G	G	G	G	S	S																																T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																										68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		162	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		V	P	I	E	G	.	.	F	D	A	A	I	L	D	A	E	F	G	L	K	E	K	G	Y	T	S	L	V	V	V	P	V	G	H	H	S	V	E	D	F	N	A	T	L	P	K	S	R	L	P
Query Conservation							.	.
Alig confidence							.	.																.															.	.	.	.
Template Conservation																								.															.	.	.	.
Template Sequence		I	W	R	S	G	A	L	T	E	S	P	V	V	R	E	A	F	G	C	R	E	Q	.	D	K	I	V	G	F	L	Y	L	G	T	P	Q	L	.	.	.	.	V	P	D	P	T	P	F	V	T
Template Known Secondary structure							G	G	G	G								T	T			S	S	.															.	.	.	.					G	G	G
Template Predicted Secondary structure																								.															.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions