Job Description F2X7N5 Confidence 100.00% Date Thu Jan 5 10:56:28 GMT 2012 Rank 29 Aligned Residues 180 % Identity 18% Template c2wqfA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:copper induced nitroreductase d; PDBTitle: crystal structure of the nitroreductase cind from2 lactococcus lactis in complex with fmn Resolution 1.35 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.
Predicted Secondary structure																																																																												.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.
Query Sequence		I	I	S	V	A	L	K	R	H	S	T	K	A	F	D	A	S	K	K	L	T	P	E	Q	A	E	Q	I	K	T	L	L	Q	Y	S	P	S	S	T	N	S	Q	P	W	H	F	I	V	A	S	T	E	E	G	K	A	R	V	A	K	S	A	A	G	N	Y	V	F	N	E	R	K	M	L	.	.	.	.	.	D
Query Conservation																																																																												.	.	.	.	.
Alig confidence																																																																												.	.	.	.	.
Template Conservation
Template Sequence		F	I	K	S	L	E	N	R	R	T	I	Y	A	L	G	R	N	V	Q	D	E	E	K	V	I	E	T	I	K	E	A	V	R	F	S	P	T	A	F	N	S	Q	T	G	R	L	L	I	L	T	G	D	A	Q	D	K	L	W	D	E	I	V	A	P	E	L	K	A	A	M	E	A	A	K	L	D	G	F	K	A
Template Known Secondary structure											B									S															T	S			G	G	G																					T																			T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	H	V	V	V	F	C	A	K	T	A	M	D	D	V	W	L	K	L	V	V	D	Q	E	D	A	D	G	H	F	A	T	P	E	A	K	A	A	N	D	K	G	R	K	F	F	A	D	M	H	R	K	D	L	H	D	D	A	E	W	M	A	K	Q	V	Y	L	N	V	G	N	F	L	L	G	V	A	A	L
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	G	T	I	L	F	F	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	V	V	K	N	L	Q	E	Q	F	A	L	Y	A	D	N	F	P	V	W	S	E	Q	G	S	G	I	I	S	V	N	V	W	T	A	L	A	E	L
Template Known Secondary structure		S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	G	G	G	T	T																								T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.																															.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		158	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		G	L	D	A	V	P	I	E	G	.	.	F	D	A	A	I	L	D	A	E	F	G	L	K	E	K	G	Y	T	S	L	V	V	V	P	V	G	H	H	S	V	E	D	F	N	A	T	L	P	K	S	R	L	P	Q	N	I	T	L	T	E	V
Query Conservation											.	.
Alig confidence											.	.																.															.	.	.	.
Template Conservation																												.															.	.	.	.
Template Sequence		G	L	G	A	N	L	Q	H	Y	N	P	L	I	D	E	A	V	A	K	E	W	N	L	P	E	S	.	W	K	L	R	G	Q	L	V	F	G	S	I	E	A	.	.	.	.	P	A	G	E	K	T	F	M	D	D	A	D	R	F	I	V	A
Template Known Secondary structure		T									T	T	T	T								T	T			T	T	.														S	.	.	.	.										G	G	G	T
Template Predicted Secondary structure																												.															.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions