Job Description P39385 Confidence 9.39% Date Thu Jan 5 12:00:18 GMT 2012 Rank 60 Aligned Residues 134 % Identity 13% Template c2zu6E_ PDB info PDB header:hydrolase Chain: E: PDB Molecule:programmed cell death protein 4; PDBTitle: crystal structure of the eif4a-pdcd4 complex Resolution 2.80 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	R	N	K	D	R	I	G	E	N	L	G	Q	F	V	Q	E	K	F	L	D	T	Q	S	L	V	A	L	I	R	R	H	E	P	A	L	L	I	G	N	W	F	S	Q	P	E	N	A	R	R	V	G	Q	H	L	L	Q	I	M	S	G	F	L	E	L	T	D	D	A	R	I	Q	R	L	L	K	R	A	V
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.
Template Sequence		T	P	R	A	P	Q	L	V	G	Q	F	I	A	R	A	V	G	D	G	I	L	C	N	T	Y	I	D	S	Y	K	G	T	V	D	.	.	.	.	.	.	.	.	C	V	Q	A	R	A	A	L	D	K	A	T	V	L	L	S	X	S	K	S	V	W	G	S	G	G	G	Q	Q	S	V	N	H	L	V	K	E	I
Template Known Secondary structure		S	T	T															T	T	S	S		T	T					T	T	T	T			.	.	.	.	.	.	.	.																		T				S		S		S	T	T	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.									.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		H	R	A	I	D	K	V	D	L	S	G	T	S	A	L	M	L	E	S	M	T	K	N	D	R	H	Q	V	L	L	D	T	L	I	A	Q	L	I	A	L	L	Q	R	.	.	D	K	S	R	K	F	I	A	Q	Q	I	V	R	W	L	E	S	E	H
Query Conservation																																													.	.
Alig confidence																																													.	.
Template Conservation
Template Sequence		D	X	L	L	K	E	Y	L	L	S	G	D	I	S	E	A	E	H	C	L	K	E	L	E	V	P	H	F	H	H	E	L	V	Y	E	A	I	I	X	V	L	E	S	T	G	E	S	T	F	K	X	I	L	D	L	L	K	S	L	W	K	S	S	T
Template Known Secondary structure																								T	T		G	G	G															S		S	S																		S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions