Job Description P39385 Confidence 9.02% Date Thu Jan 5 12:00:18 GMT 2012 Rank 65 Aligned Residues 121 % Identity 9% Template c2qtqB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a predicted dna-binding transcriptional regulator2 (saro_1072) from novosphingobium aromaticivorans dsm at 1.85 a3 resolution Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	F	N	R	Y	L	S	E	L	W	G	D	L	R	E	W	L	K	V	D	I	N	S	E	D	S	R	V	K	E	R	I	A	R	A	G	Q	W	F	G	E	T	L	I	A	D	D	A	L	R	A	S	L	N	G	H	L	E	Q	A	A	H	R	V	A	P	E	F	S	A	F	L	T	R	H	I	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	L	L	K	A	L	L	D	R	D	X	E	N	I	V	K	S	V	D	A	L	L	A	K	D	D	X	S	P	E	A	K	L	R	R	H	I	S	K	C	I	D	T	Y	Y	D	Y	P	Y	L	N	R	L	L	X	R	L	V	R	D	S	D	E	A	E	A	K	R	I	A	D	Q	Y	L	L	P	L	H	R
Template Known Secondary structure																									S			S	S																					T	T																									T
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	K	S	W	D	A	R	D	M	S	R	Q	I	E	L	N	I	G	K	D	L	Q	F	I	R	V	N	G	T	L	V	G	G	C	I	G	L	I	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	N	R	F	I	G	E	G	V	K	A	G	V	F	R	P	I	N	P	Q	L	F	Y	F	T	V	T	G	A	A	D	R	F	F	S	A	R	L	V	L
Template Known Secondary structure													T	T	S	B														T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions