Job Description P39385 Confidence 15.74% Date Thu Jan 5 12:00:18 GMT 2012 Rank 27 Aligned Residues 189 % Identity 15% Template c1ug3A_ PDB info PDB header:translation Chain: A: PDB Molecule:eukaryotic protein synthesis initiation factor PDBTitle: c-terminal portion of human eif4gi Resolution 2.24 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.																																									.
Query SS confidence																																	.	.	.	.	.	.	.	.																																									.
Query Sequence		I	P	R	N	K	D	R	I	G	E	N	L	G	Q	F	V	Q	E	K	F	L	D	T	Q	S	L	V	A	L	I	R	.	.	.	.	.	.	.	.	R	H	E	P	A	L	L	I	G	N	W	F	S	Q	P	E	N	A	R	R	V	G	Q	H	L	L	Q	I	M	S	G	F	L	E	L	T	D	D	A	R	.
Query Conservation																																	.	.	.	.	.	.	.	.																																									.
Alig confidence																																	.	.	.	.	.	.	.	.																																									.
Template Conservation
Template Sequence		I	P	H	V	W	L	Y	L	A	E	L	V	T	P	I	L	Q	E	G	G	V	P	M	G	E	L	F	R	E	I	T	K	P	L	R	P	L	G	K	A	A	S	L	L	L	E	I	L	G	L	L	C	K	S	M	G	P	K	K	V	G	T	L	W	R	E	A	G	L	S	W	K	E	F	L	P	E	G	Q	D
Template Known Secondary structure			T	T										G	G	G	G	S	T	T	S											T	T	T					T																													T	T			G	G	G	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		1334	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.											.
Predicted Secondary structure																																																.																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.																							.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Q	R	L	L	K	R	A	V	H	R	A	I	D	K	V	D	L	S	G	T	S	A	L	M	L	E	S	M	T	K	N	D	R	H	Q	V	L	L	D	T	L	I	A	Q	L	.	I	A	L	L	Q	R	D	K	S	R	K	F	I	A	Q	Q	I	V	R	W	L	E	.	.	.	.	.	.	.	.	.	.	S
Query Conservation																																																.																							.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	A	F	V	A	E	Q	K	V	E	Y	T	L	A	L	P	S	E	E	L	N	R	Q	L	E	K	L	L	K	E	G	S	S	N	Q	R	V	F	D	W	I	E	A	N	L	S	E	Q	Q	I	V	S	N	T	L	V	R	A	L	M	T	A	V	C	Y	S	A	I	I	F	E	T	P	L	R	V	D	V	A
Template Known Secondary structure									T	T		G	G	G																		T	T														S						T																T				S	S	S
Template Predicted Secondary structure
Template SS confidence
		1414	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	P	L	K	A	K	I	L	P	T	E	W	L	G	E	H	S	A	E	L	V	S	D	A	V	N	S	L	L	D	D	I	S	R	D	R	A	H	Q	I	R	H	A	F	D	R	A	T	F
Query Conservation
Alig confidence																																			.
Template Conservation																																			.
Template Sequence		V	L	K	A	R	A	K	L	L	Q	K	Y	L	C	D	E	Q	K	E	L	Q	A	L	Y	A	L	Q	A	L	V	V	T	L	.	E	Q	P	P	N	L	L	R	M	F	F	D	A	L	Y	D
Template Known Secondary structure																S																		T	.	T			T	T
Template Predicted Secondary structure																																			.
Template SS confidence
		1504	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.		.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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