Job Description P39385 Confidence 8.18% Date Thu Jan 5 12:00:18 GMT 2012 Rank 76 Aligned Residues 118 % Identity 13% Template c1u0bB_ PDB info PDB header:ligase/rna Chain: B: PDB Molecule:cysteinyl trna; PDBTitle: crystal structure of cysteinyl-trna synthetase binary2 complex with trnacys Resolution 2.30 Å

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		54	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.							.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure							.																																			.	.	.	.															.	.	.	.	.	.
Query SS confidence							.																																			.	.	.	.															.	.	.	.	.	.
Query Sequence		D	W	F	A	V	.	V	A	L	F	R	R	V	P	I	P	I	I	S	R	H	T	A	I	I	P	R	N	K	D	R	I	G	E	N	L	G	Q	F	V	.	.	.	.	Q	E	K	F	L	D	T	Q	S	L	V	A	L	I	.	.	.	.	.	.	R	R	H	E	P	A	L	L	I	G	N	W	F	S	Q	P
Query Conservation							.																																			.	.	.	.															.	.	.	.	.	.
Alig confidence							.							.																												.	.	.	.															.	.	.	.	.	.												.	.	.	.	.
Template Conservation														.																																																															.	.	.	.	.
Template Sequence		N	E	I	A	Q	S	T	C	A	H	D	G	.	Q	Y	V	N	Y	W	M	H	S	G	M	V	M	V	D	R	E	K	M	S	K	S	L	G	N	F	F	T	V	R	D	V	L	K	Y	Y	D	A	E	T	V	R	Y	F	L	M	S	G	H	Y	R	S	Q	L	N	Y	S	E	E	N	L	K	.	.	.	.	.
Template Known Secondary structure											S	S	S	.															T	T					T	T	T	T				B					T	T	T	S										T	S	S		T	T	S											.	.	.	.	.
Template Predicted Secondary structure														.																																																															.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	A	R	R	V	G	Q	H	L	L	Q	I	M	S	G	F	L	E	L	T	D	D	A	R	I	Q	R	L	L	K	R	A	V	H	R	A	I	D	K	V	D	L	S	G	T	S	A	L	M	L	E	S	M	T	K
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	Q	A	R	A	A	L	E	R	L	Y	T	A	L	R	G	T	D	K	T	V	A	P	A	G	G	E	A	F	E	A	R	F	I	E	A	M	D	D	D	F	N	T	P	E	A	Y	S	V	L	F	D	M	A	R	E
Template Known Secondary structure		.														T	T			T	T	S				S														B	T
Template Predicted Secondary structure		.
Template SS confidence
			311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions