Job Description P39385 Confidence 8.04% Date Thu Jan 5 12:00:18 GMT 2012 Rank 82 Aligned Residues 135 % Identity 8% Template c1dvpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine PDBTitle: crystal structure of the vhs and fyve tandem domains of hrs,2 a protein involved in membrane trafficking and signal3 transduction Resolution 2.00 Å

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		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	Q	R	L	L	K	R	A	V	H	R	A	I	D	K	V	D	L	S	G	T	S	A	L	M	L	E	S	M	T	K	N	D	R	H	Q	V	L	L	D	T	L	I	A	Q	L	I	A	L	L	Q	R	D	K	S	R	K	F	I	A	Q	Q	I	V	R	W	L	E	S	E	H	P	L	K	A	K	I	L	P
Query Conservation
Alig confidence																																																			.	.																				.	.	.	.	.	.	.	.
Template Conservation																																																			.	.																				.	.	.	.	.	.	.	.
Template Sequence		S	F	C	K	N	L	E	N	A	T	S	H	L	R	L	E	P	D	W	P	S	I	L	L	I	C	D	E	I	N	Q	K	D	V	T	P	K	N	A	F	A	A	I	K	K	K	M	N	S	.	.	P	N	P	H	S	S	C	Y	S	L	L	V	L	E	S	I	V	K	N	.	.	.	.	.	.	.	.	C	G
Template Known Secondary structure													T	T		S	S															T	T	S	S														T		.	.	S	S																		.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																			.	.																				.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.									.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.				.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		T	E	W	L	G	E	H	S	A	E	L	V	S	D	A	V	N	S	L	L	D	D	I	S	R	D	R	A	H	Q	I	R	H	A	F	D	R	A	T	F	A	L	I	D	K	L	K	N	D	P	E	.	.	.	M	A	A	R	A	D	A	V	K	S	Y	L	K	E	D	E	A
Query Conservation																																																					.	.	.
Alig confidence																						.	.	.																													.	.	.
Template Conservation																						.	.	.
Template Sequence		A	P	V	H	E	E	V	F	T	K	E	N	C	E	M	F	S	S	F	L	.	.	.	E	S	T	P	H	E	N	V	R	Q	K	M	L	E	L	V	Q	T	W	A	Y	A	F	R	S	S	D	K	Y	Q	A	I	K	D	T	M	T	I	L	K	A	K	G	H	T	F	P	E
Template Known Secondary structure									S	S												.	.	.				S																			T	T	T		S	S														T	T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions