Job Description P0ACY1 Confidence 100.00% Date Thu Jan 5 11:19:23 GMT 2012 Rank 6 Aligned Residues 166 % Identity 18% Template c3n2sD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:nadph-dependent nitro/flavin reductase; PDBTitle: structure of nfra1 nitroreductase from b. subtilis Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	L	E	L	L	I	N	R	R	S	A	S	R	L	A	E	P	A	P	T	G	E	Q	L	Q	N	I	L	R	A	G	M	R	A	P	D	H	K	S	M	Q	P	W	H	F	F	V	I	E	G	E	G	R	E	R	F	S	A	V	L	E	Q	G	A	I	A	A	G	S	D	D	K	A	I	D	K	A	R	N
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	T	I	E	T	I	L	N	H	R	S	I	R	S	F	T	D	Q	L	L	T	A	E	E	I	D	T	L	V	K	S	A	Q	A	A	S	T	S	S	Y	V	Q	A	Y	S	I	I	G	V	S	D	P	E	K	K	R	E	L	S	V	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	Q	P
Template Known Secondary structure									T							B		S																	T	S			G	G	G																						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		G
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.															.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.																	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	F	R	A	P	L	I	I	T	V	V	A	K	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	N	H	K	V	P	R	W	E	Q	E	M	S	A	G	C	A	V	M	A	M	Q	M	A	A	V	A	Q	G	F	G	G	I	W	R	S	G	A	L	T	E	S	P	V	V	R	E	A
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	V	E	K	N	G	H	F	F	V	F	C	A	D	L	Y	R	H	Q	Q	L	A	E	E	K	G	E	H	I	S	E	L	L	E	N	T	E	X	F	X	V	S	L	I	D	A	A	L	A	A	Q	N	X	S	I	A	A	E	S	X	G	L	G	I	C	Y	I	G	G	I	R	N	E	L	D	K	V	T	E	V
Template Known Secondary structure		G	G	T	S	S	S																				T				T	T	G	G	G	S																									T	T							G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	C	R	E	Q	D	K	I	V	G	F	L	Y	L	G	T	P	Q	L	K	A	S	T	S	I	N	V	P	D	P	T	P	F	V	T	Y
Query Conservation
Alig confidence																															.
Template Conservation																															.
Template Sequence		L	Q	T	P	D	H	V	L	P	L	F	G	L	A	V	G	H	P	A	N	L	S	G	K	K	P	R	L	P	.	K	Q	A	V	Y	H	E
Template Known Secondary structure			T			T	T												B	S											.							S
Template Predicted Secondary structure																															.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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