Job Description P0ACY1 Confidence 100.00% Date Thu Jan 5 11:19:23 GMT 2012 Rank 21 Aligned Residues 166 % Identity 18% Template c3bemA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative nad(p)h nitroreductase ydfn; PDBTitle: crystal structure of putative nitroreductase ydfn (2632848) from2 bacillus subtilis at 1.65 a resolution Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		D	A	L	E	L	L	I	N	R	R	S	A	S	R	L	.	A	E	P	A	P	T	G	E	Q	L	Q	N	I	L	R	A	G	M	R	A	P	D	H	K	S	M	Q	P	W	H	F	F	V	I	E	G	E	G	R	E	R	F	S	A	V	L	E	Q	G	A	I	A	A	G	S	D	D	K	A	I	D	K	A	R
Query Conservation																	.
Alig confidence																	.																																																									.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		E	F	T	H	L	V	N	E	R	R	S	A	S	N	F	L	S	G	H	P	I	T	K	E	D	L	N	E	X	F	E	L	V	A	L	A	P	S	A	F	N	L	Q	H	T	K	Y	V	T	V	L	D	Q	D	V	K	E	K	L	K	Q	A	A	N	G	Q	Y	K	V	V	S	S	.	.	.	.	.	.	.	.
Template Known Secondary structure														S				S	S																T	T	S			G	G	G																					T	T	T	T		T					S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																																					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	P	F	R	A	P	L	I	I	T	V	V	A	K	C	E	E	N	H	K	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	W	E	Q	E	M	S	A	G	C	A	V	M	A	M	Q	M	A	A	V	A
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	S	A	V	L	L	V	L	G	D	K	Q	A	Y	Q	Q	A	A	D	I	Y	E	G	L	K	V	L	G	I	L	N	K	Q	E	Y	D	H	X	V	Q	D	T	V	S	F	Y	E	N	R	G	E	Q	F	K	R	D	E	A	I	R	N	A	S	L	S	A	X	X	F	X	L	S	A	A	A
Template Known Secondary structure		.	.	.	.	.	.	S									T	T	G	G	G	G											T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		Q	G	F	G	G	I	W	R	S	G	A	L	T	E	S	P	V	V	R	E	A	F	G	C	R	E	Q	D	K	I	V	G	F	L	Y	L	G	T	P	Q	L	K	A	S	T	S	.	I	N	V	P	D	P	T	P	F	V	T	Y	F
Query Conservation																																																.
Alig confidence												.	.																																			.
Template Conservation												.	.
Template Sequence		A	G	W	D	T	C	P	X	I	G	.	.	F	D	A	E	A	V	K	R	I	L	N	I	D	D	Q	F	E	V	V	X	X	I	T	I	G	K	E	K	T	E	S	R	R	P	R	G	Y	R	K	P	V	N	E	F	V	E	Y	X
Template Known Secondary structure		T	T									.	.	S										T			T	T														G	G	G										G	G	G	T
Template Predicted Secondary structure												.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions