|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | |
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | L | E | L | L | I | N | R | R | S | A | S | R | L | A | . |
E | P | A | P | T | G | E | Q | L | Q | N | I | L | R | A | G | M | R | A | P | D | H | K | S | M | Q | P | W | H | F | F | V | I | E | G | E | G | R | E | R | F | S | A | V | L | E | Q | G | A | I | A | A | G | S | D | D | K | A | I | D | K | A | R |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|
|
|
|
|   |
|   | . |   |   |   |
|   |   |
|   |
|   |   |
|
|   |
|
|   |   |
|
|
|   |   |
|   |
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|   |   |
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |   |
|   |
|   |   |   |
|
|
|
|   |   |   |
|   |   |   | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | L | R | E | L | V | A | R | S | R | S | I | R | R | F | D | E | H | V | A | V | N | D | A | T | L | R | D | L | V | E | L | V | C | Y | T | P | S | A | A | N | R | Q | L | L | R | F | L | P | V | T | G | A | D | X | S | D | . |
. |
. |
. |
. |
. |
K | V | F | P | C | L | K | W | A | G | Y | L | E | D | W | P | G |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
|
| B |
|
|
| B |
| T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
| G | G | G |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | T | T | G | G | G | B |
|
|
| T | T |
| T | T |
|
| S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | A | P | F | R | A | P | L | I | I | T | V | V | A | K | C | E | E | N | H | K | V | P | R | W | E | Q | E | M | S | A | G | C | A | V | M | A | M | Q | M | A | A | V | A | Q | G | F | G | G | I | W | R | S | G | A | L | T | E | S | P | V | V | R | E | A | F | G | C | R | E | Q | D | K | I | V | G | F | L | Y | L |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|
|
|   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|
|   |
|
|
|   |
|   |
|
|
|
|
|   |   |   |   | . | . |   |   |   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
P | E | P | G | E | R | P | A | A | A | L | V | X | L | C | . |
. |
. |
. |
R | N | E | D | L | P | G | A | A | C | D | S | G | I | A | A | Q | T | I | X | L | G | A | A | E | K | E | L | G | G | C | I | V | A | A | . |
. |
I | D | R | E | R | L | X | A | S | L | G | I | P | D | A | W | T | V | L | L | V | I | A | L |
Template Known Secondary structure |   |
|
| T | T | S | S |
| S |  |  |  |  |  |  |  | . | . | . | . |  | G | G | G | G | G | G | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
| . | . | B |
|  |  |  |  |  |  |  |  | T |
|
| T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |
|
|
| . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
|
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
|
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
  |
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | T | P | Q | L | K | A | S | T | S | I | N | V | P | D | P | T | P | F | V | T | Y | F |
Query Conservation |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   | . | . |
|   |   |   |
Template Sequence |   |
G | K | P | A | E | T | V | V | I | D | Q | I | K | P | G | D | D | . |
. |
I | R | Y | W |
Template Known Secondary structure |   |
 |
| B |
| S |
|  |  |  |  |  |  |
| T | T | S |
| . | . |
|
|
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  | . | . |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | |
|
. | . | 180 | . |
  |