Job Description P0ACY1 Confidence 100.00% Date Thu Jan 5 11:19:23 GMT 2012 Rank 34 Aligned Residues 172 % Identity 9% Template c2h0uA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadph-flavin oxidoreductase; PDBTitle: crystal structure of nad(p)h-flavin oxidoreductase from helicobacter2 pylori Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.															.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																		.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	D	A	L	E	L	L	I	N	R	R	S	A	S	R	L	.	A	E	P	A	P	T	G	E	Q	L	Q	N	I	L	R	A	G	M	R	A	P	D	H	K	S	M	Q	P	W	H	F	F	V	I	E	G	E	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	F	S	A	V	L	E	Q	G
Query Conservation																		.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Q	V	V	A	L	Q	H	Q	R	F	A	A	K	K	Y	D	P	N	R	R	I	S	Q	K	D	W	E	A	L	V	E	V	G	R	L	A	P	S	S	I	G	L	E	P	W	K	X	L	L	L	K	N	A	S	H	F	V	I	Y	L	A	R	K	G	V	T	Y	D	S	D	Y	V	K	K	V	X	H	E	V
Template Known Secondary structure													B				B		T	T																	T				G	G	G																						S				T	T											T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	A	G	S	D	D	K	A	I	D	K	A	R	N	A	P	F	R	A	P	L	I	I	T	V	V	A	K	C	E	E	N	H	K	V	P	R	W	E	Q	E	M	S	A	G	C	A	V	M	A	M	Q	M	A	A	V	A	Q	G	F	G	G	I	W	R	S	G	A	L	T	E	S	P	V	V	R	E	A
Query Conservation
Alig confidence																								.	.	.	.	.	.	.																																									.	.
Template Conservation																								.	.	.	.	.	.	.																																									.	.
Template Sequence		K	K	R	D	Y	D	T	N	S	R	F	A	Q	I	I	K	N	F	Q	E	N	D	.	.	.	.	.	.	.	X	K	L	N	S	E	R	S	L	F	D	W	A	S	K	Q	T	Y	I	Q	X	A	N	X	X	X	A	A	A	X	L	G	I	D	S	C	P	I	E	G	.	.	Y	D	Q	E	K	V	E	A	Y
Template Known Secondary structure		T						T	T	S												T	T	.	.	.	.	.	.	.	S				S																										T	T									.	.	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.																																									.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.								.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.
		146	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure					.	.	.	.	.
Query SS confidence					.	.	.	.	.
Query Sequence		F	G	C	.	.	.	.	.	R	E	Q	D	K	I	V	G	F	L	Y	L	G	T	P	Q	L	K	A	S	T	S	I	N	V	P	D	P	T	P	F	V	T	Y
Query Conservation					.	.	.	.	.
Alig confidence					.	.	.	.	.																										.
Template Conservation																																			.
Template Sequence		L	E	E	K	G	Y	L	N	T	A	E	F	G	V	S	V	X	A	C	F	G	Y	R	N	Q	E	I	T	P	K	T	R	W	.	K	T	E	V	I	Y	E	V
Template Known Secondary structure						T	S			T	T	T												B	S	S									.
Template Predicted Secondary structure																																			.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions