Job Description P32135 Confidence 100.00% Date Thu Jan 5 11:49:20 GMT 2012 Rank 2 Aligned Residues 413 % Identity 9% Template d1pv7a_ SCOP info MFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter Resolution 3.60

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		L	T	K	K	K	W	A	L	F	S	L	L	T	L	C	G	G	T	I	Y	K	L	P	S	L	K	D	A	F	Y	I	P	.	M	Q	E	Y	F	H	L	T	N	G	Q	I	G	N	A	M	S	V	N	S	F	V	T	T	V	G	F	F	L	S	I	Y	F	A	D	K	L	P	R	R	Y	T	M	S	F	S	L
Query Conservation																																		.
Alig confidence																																		.
Template Conservation
Template Sequence		M	Y	Y	L	K	N	T	N	F	W	M	F	G	L	F	F	F	F	Y	F	F	I	M	G	A	Y	F	P	F	F	P	I	W	L	H	D	I	N	H	I	S	K	S	D	T	G	I	I	F	A	A	I	S	L	F	S	L	L	F	Q	P	L	F	G	L	L	S	D	K	L	G	L	R	K	Y	L	L	W	I	I
Template Known Secondary structure							S																																																					T												T	T		T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	T	G	L	L	G	V	Y	L	T	T	M	P	G	Y	W	G	I	L	F	V	W	A	L	F	G	V	T	C	D	M	M	N	W	P	V	L	L	K	S	V	S	R	L	G	N	S	E	Q	Q	G	R	L	F	G	F	F	E	T	G	R	G	I	V	D	T	V	V	A	F	S	A	L	A	V	F	T	W	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	M	L	V	M	F	A	P	F	F	I	F	I	F	G	P	L	L	Q	Y	N	I	L	V	G	S	I	V	G	G	I	Y	L	G	F	C	F	N	A	G	A	P	A	V	E	A	F	I	E	K	V	S	R	R	S	N	F	E	F	G	R	A	R	M	F	G	C	V	G	W	A	L	G	A	S	I	V	G	I
Template Known Secondary structure							T								T							T	T								T	T	T	T	G	G	G	G	G	T	T																	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	G	L	L	G	F	K	A	G	I	W	F	Y	S	L	I	V	I	A	V	G	I	I	I	F	F	V	L	N	D	K	E	E	A	P	S	V	E	V	K	K	E	D	G	A	S	K	N	T	S	M	T	S	V	L	K	D	K	T	I	W	L	I	A	F	N	V	F	F	V	Y	A	V	Y	C	G	L	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	F	T	I	N	N	Q	F	V	F	W	L	G	S	G	C	A	L	I	L	A	V	L	L	F	F	A	K	T	D	A	P	S	S	A	T	V	A	N	A	V	G	A	N	H	S	A	F	S	L	K	L	A	L	E	L	F	R	Q	P	K	L	W	F	L	S	L	Y	V	I	G	V	S	C	T	Y	D	V	F	D
Template Known Secondary structure																											S	S				S		S	S	S		S	S					S														T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	P	F	L	K	N	I	Y	L	L	P	V	A	L	V	G	A	Y	G	I	I	N	Q	Y	C	L	K	M	I	G	G	P	I	G	G	M	I	S	D	K	I	L	K	S	P	S	K	Y	L	C	Y	T	F	I	I	S	T	A	A	L	V	L	L	I	M	L	P	H	E	S	M	P	V	Y	L	G	M	A	C
Query Conservation
Alig confidence																																																																									.	.	.
Template Conservation																																																																									.	.	.
Template Sequence		Q	Q	F	A	N	F	F	T	S	F	F	A	T	G	E	Q	G	T	R	V	F	G	Y	V	T	T	M	G	E	L	L	N	A	S	I	M	F	F	A	P	L	I	I	N	R	I	G	G	K	N	A	L	L	L	A	G	T	I	M	S	V	R	I	I	G	S	S	F	A	T	S	.	.	.	A	L	E	V	V	I
Template Known Secondary structure									T	T	S	S	S																									T	T																														T				.	.	.
Template Predicted Secondary structure																																																																									.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.				.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		T	L	G	F	G	A	I	V	F	T	Q	R	A	V	F	F	A	P	I	G	E	A	K	I	A	E	N	K	T	G	A	A	M	A	L	G	S	F	I	G	Y	.	A	P	A	M	F	C	F	S	L	Y	G	Y	I	L	D	L	N	P	G	I	I	G	Y	K	I	V	F	G	I	M	A	C	F	A	F	S	G	A
Query Conservation																																											.
Alig confidence																																											.																			.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		L	K	T	L	H	M	F	E	V	P	F	L	L	V	G	C	F	K	Y	I	T	S	Q	F	E	V	R	F	S	A	T	I	Y	L	V	C	F	C	F	F	K	Q	L	A	M	I	F	M	S	V	L	A	G	N	M	Y	E	S	I	G	.	.	.	.	F	Q	G	A	Y	L	V	L	G	L	V	A	L	G	F	T
Template Known Secondary structure																									S		G	G	G										T	T	T																					.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.					.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		400	.	.	.	.	.	.	.	.	.	410			.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		V	V	S	V	M	L	V	K	R	I	S	.	.	Q	R	K	K	E	M	L	A	A	E	A
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		L	I	S	V	F	T	L	S	G	P	G	P	L	S	L	L	R	R	Q	V	N	E	V	A
Template Known Secondary structure								S			S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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