Return to main results Retrieve Phyre Job Id

Job DescriptionP32135
Confidence1.75%DateThu Jan 5 11:49:20 GMT 2012
Rank66Aligned Residues59
% Identity7%Templatec3a7kD_
PDB info PDB header:membrane proteinChain: D: PDB Molecule:halorhodopsin; PDBTitle: crystal structure of halorhodopsin from natronomonas2 pharaonis
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   357..360.........370.........380.........390.........400.........410.....
Predicted Secondary structure 






Query SS confidence 


























































Query Sequence  SFIGYAPAMFCFSLYGYILDLNPGIIGYKIVFGIMACFAFSGAVVSVMLVKRISQRKKE
Query Conservation               
 
 
        
    
                       
  
Alig confidence 


























































Template Conservation   
  

 
  



 

 

        

    

  
 
 
 
 
       
    
Template Sequence  KLFTAITFDIAMCVTGLAAALTTSSHLMRWFWYAISCACFIVVLYILLVEWAQDAKAAG
Template Known Secondary structure 

S
TT
Template Predicted Secondary structure 






Template SS confidence 


























































   148.150.........160.........170.........180.........190.........200......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions