 |
| Job Description | P32135 | | Confidence | 1.46% | Date | Thu Jan 5 11:49:20 GMT 2012 |
| Rank | 88 | Aligned Residues | 31 |
| % Identity | 13% | Template | c2k1aA_ |
| PDB info |
PDB header:cell adhesion | Chain: A: PDB Molecule:integrin alpha-iib; |
PDBTitle: bicelle-embedded integrin alpha(iib) transmembrane segment
|
| Resolution | UNK |
|
| | |
384 | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | | | | | | | | | | | | | | | | | |
|
| | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
Y | K | I | V | F | G | I | M | A | C | F | A | F | S | G | A | V | V | S | V | M | L | V | K | R | I | S | Q | R | K | K |
| Query Conservation | |
| | | |
| | | | | | | | | | | | | | | | | | | | | | | |
| | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
|
| |
|
|
|
|
| | |
|
| | |
|
|
| |
|
|
|
|
| |
|
| Template Sequence | |
W | W | V | L | V | G | V | L | G | G | L | L | L | L | T | I | L | V | L | A | M | W | K | V | G | F | F | K | R | N | R |
| Template Known Secondary structure | |
| | | | | | | | | | | | | | | | | | | | | | | T | T | T | T |
|
|
|
|
| Template Predicted Secondary structure | |
| | | | | | | | | | | | | | | | | | | | | | | | | | | |
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
967 | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
