Job Description P0A879 Confidence 100.00% Date Thu Jan 5 11:07:07 GMT 2012 Rank 5 Aligned Residues 330 % Identity 18% Template d1wkva1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.00

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		7	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure														.	.																						.																																												.
Query SS confidence														.	.																						.																																												.
Query Sequence		P	Y	F	G	E	F	G	G	M	Y	V	P	.	.	Q	I	L	M	P	A	L	R	Q	L	E	E	A	F	V	S	A	Q	K	D	P	.	E	F	Q	A	Q	F	N	D	L	L	K	N	Y	A	G	R	P	T	A	L	T	K	C	Q	N	I	T	A	G	T	N	T	T	L	Y	L	K	R	E	D	L	L	H	.
Query Conservation														.	.																						.																																												.
Alig confidence														.	.											.											.												.	.	.																.														.
Template Conservation																										.																							.	.	.																.
Template Sequence		K	A	L	Y	V	I	G	A	S	R	I	P	V	G	D	G	C	S	H	T	L	E	E	L	.	G	V	F	D	I	S	V	P	G	E	M	V	F	P	S	P	L	D	F	F	E	R	.	.	.	G	K	P	T	P	L	V	R	S	R	L	Q	L	P	N	.	G	V	R	V	W	L	K	L	E	W	Y	N	P	F
Template Known Secondary structure								T		S				B	S	S	S					T	T	T	T	.	T	T	T				S		T	T				S	S								.	.	.	S		S											S	T	.	T								G	G	G	S	T	T
Template Predicted Secondary structure																										.																							.	.	.																.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		G	G	A	H	K	T	N	Q	V	L	G	Q	A	L	L	A	K	R	M	G	K	T	.	E	I	I	A	E	T	G	A	G	Q	H	G	V	A	S	A	L	A	S	A	L	L	G	L	K	C	R	I	Y	M	G	A	K	D	V	E	R	Q	S	P	N	V	F	R	M	R	L	M	G	A	E	V	I	P	V	H	S
Query Conservation																								.
Alig confidence																								.																																							.	.	.
Template Conservation																																																															.	.	.
Template Sequence		S	L	S	V	K	D	R	P	A	V	E	I	I	S	R	L	S	R	R	V	E	K	G	S	L	V	A	D	A	T	S	S	N	F	G	V	A	L	S	A	V	A	R	L	Y	G	Y	R	A	R	V	Y	L	P	G	A	A	E	E	F	G	.	.	.	K	L	L	P	R	L	L	G	A	Q	V	I	V	D	P	E
Template Known Secondary structure		T	S	B	T	T												T	T	T	S		T	T																						T	T									T	T	S					.	.	.							T	T							T	T
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	A	T	L	K	D	A	C	N	E	A	L	R	D	W	S	G	S	Y	E	T	A	H	Y	M	L	G	T	A	A	G	P	H	P	Y	P	T	I	V	R	E	F	Q	R	M	I	G	E	E	T	K	A	Q	I	L	E	R	E	G	R	L	P	D	A	V	I	A	C	V	G	G	G	S	N	A	I	G	M	F
Query Conservation
Alig confidence										.	.															.	.	.	.	.	.																													.
Template Conservation										.	.															.	.	.	.	.	.																													.
Template Sequence		A	P	S	T	V	H	L	L	.	.	P	R	V	M	K	D	S	K	N	E	G	F	V	H	.	.	.	.	.	.	V	N	Q	F	Y	N	D	A	N	F	E	A	H	M	R	G	T	A	R	E	I	F	V	Q	S	R	R	G	.	G	L	A	L	R	G	V	A	G	S	L	G	T	S	G	H	M	S	A	A	A
Template Known Secondary structure			S	S	S	G	G	G		.	.															.	.	.	.	.	.			T	T	T											T												T	.	T											S	S	S
Template Predicted Secondary structure										.	.															.	.	.	.	.	.																													.
Template SS confidence
		200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.							.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		242	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		A	D	F	I	N	.	E	T	N	V	G	L	I	G	V	E	P	G	G	H	G	I	E	T	G	E	H	G	A	P	L	K	H	G	R	V	G	I	Y	F	G	M	K	A	P	M	M	Q	T	E	D	G	Q	I	E	E	S	Y	S	I	S	A	G	L	D	F	P	S	V	G	P	Q	H	A	Y	L	N	S	T	G
Query Conservation							.
Alig confidence							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	Y	L	Q	S	V	D	P	S	I	R	A	V	L	V	Q	P	A	Q	G	D	S	I	P	G	I	R	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	G	M	L	W	I	N	M	L	D	I
Template Known Secondary structure									T	T										T	T				T	T				G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G			S					S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.																																								300	.	.	.	.	.	.	.	.	.	310	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	D	Y	V	S	I	T	D	D	E	A	L	E	A	F	K	T	L	C	L	H	E	G	I	I	P	A	L	E	S	S	H	A	L	A	H	A	L	K	M	M	R	E	N	P	D	K	E	Q	L	L	V	V	N	L	S	G	R	G	D	K	D	I	F	T	V	H	D	I	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y	T	L	A	E	V	T	L	E	E	A	M	E	A	V	V	E	V	A	R	S	D	G	L	V	I	G	P	S	G	G	A	A	V	K	A	L	A	K	K	A	A	E	G	D	L	E	P	G	D	Y	V	V	V	V	P	D	T	G	F	K	Y	L	S	L	V	Q	N	A	L	E
Template Known Secondary structure																									S			B																	T	T		S		S									B	B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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