Job Description P0A879 Confidence 42.72% Date Thu Jan 5 11:07:07 GMT 2012 Rank 164 Aligned Residues 109 % Identity 17% Template d1vjja4 SCOP info Cysteine proteinases Cysteine proteinases Transglutaminase core Resolution 1.90

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.				.
Predicted Secondary structure																																																													.	.	.	.														.	.	.
Query SS confidence																																																													.	.	.	.														.	.	.
Query Sequence		G	M	Y	V	P	Q	I	L	M	P	A	L	R	Q	L	E	E	A	F	V	S	A	Q	K	D	P	E	F	Q	A	Q	F	N	D	L	L	K	N	Y	A	G	R	P	T	A	L	T	K	C	Q	N	I	T	A	G	T	N	T	T	.	.	.	.	L	Y	L	K	R	E	D	L	L	H	G	G	A	.	.	.	H
Query Conservation																																																													.	.	.	.														.	.	.
Alig confidence														.															.	.	.	.	.	.	.	.	.																								.	.	.	.														.	.	.
Template Conservation														.															.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	F	E	E	D	I	L	S	I	C	L	.	S	I	L	D	R	S	L	N	F	R	R	D	A	A	.	.	.	.	.	.	.	.	.	T	D	V	A	S	R	N	D	P	K	Y	V	G	R	V	L	S	A	M	I	N	S	N	D	D	N	G	V	L	A	G	N	W	S	G	T	Y	T	G	G	R	D	P	R
Template Known Secondary structure			T	T	S	T	T							.				T	T	S									.	.	.	.	.	.	.	.	.					G	G	G													T	B		T	T	T	T		S						S	S			T	T	S			G	G
Template Predicted Secondary structure														.															.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.										.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	N	Q	V	L	G	Q	A	L	L	A	K	R	M	G	K	T	E	I	I	A	E	T	G	A	G	Q	H	G	V	A	S	A	L	A	S	A	L	L	G	L	K	C	R	I	Y
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		S	W	N	G	S	V	E	I	L	K	N	W	K	K	S	G	L	S	P	.	V	R	Y	G	Q	C	W	V	F	A	G	T	L	N	T	A	L	R	S	L	G	I	P	S	R	V	I
Template Known Secondary structure		G			B	S										T	T	S			.																					T
Template Predicted Secondary structure																					.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions