Job Description P0A879 Confidence 100.00% Date Thu Jan 5 11:07:07 GMT 2012 Rank 28 Aligned Residues 318 % Identity 20% Template d1v7ca_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.00

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.											.	.
Query SS confidence																				.	.	.	.	.	.	.	.											.	.
Query Sequence		K	D	P	E	F	Q	A	Q	F	N	D	L	L	K	N	Y	A	G	.	.	.	.	.	.	.	.	R	P	T	A	L	T	K	C	Q	N	.	.	I	T	A	G	T	N	T	T	L	Y	L	K	R	E	D	L	L	H	G	G	A	H	K	T	N	Q	V	L	G	Q	A	L	L	A	K	R	M	G	K	T	E	I
Query Conservation																				.	.	.	.	.	.	.	.											.	.
Alig confidence									.											.	.	.	.	.	.	.	.											.	.																																										.
Template Conservation									.																																																																								.
Template Sequence		R	P	P	L	I	E	R	.	Y	R	N	L	L	P	V	S	E	K	T	P	V	I	S	L	L	E	G	S	T	P	L	I	P	L	K	G	P	E	E	A	R	K	K	G	I	R	L	Y	A	K	Y	E	G	L	N	P	T	G	S	F	K	D	R	G	M	T	L	A	V	S	K	A	V	E	G	G	A	Q	A	.
Template Known Secondary structure									.	T	G	G	G	S	S			T	T	S					S																		T	T	T								G	G	G	S	T	T	S	B	T															T	T		S		.
Template Predicted Secondary structure									.																																																																								.
Template SS confidence
		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	E	T	G	A	G	Q	H	G	V	A	S	A	L	A	S	A	L	L	G	L	K	C	R	I	Y	M	G	A	K	D	V	E	R	Q	S	P	N	V	F	R	M	R	L	M	G	A	E	V	I	P	V	H	S	G	S	A	T	L	K	D	A	C	N	E	A	L	R	D	W	S	G	S	Y	E	T	A	H	Y
Query Conservation
Alig confidence																																	.	.																								.	.	.	.																				.
Template Conservation																																	.	.																								.	.	.	.																				.
Template Sequence		V	A	C	A	S	T	G	N	T	A	A	S	A	A	A	Y	A	A	R	A	G	I	L	A	I	V	V	L	P	A	G	.	.	Y	V	A	L	G	K	V	A	Q	S	L	V	H	G	A	R	I	V	Q	V	E	G	N	.	.	.	.	F	D	D	A	L	R	L	T	Q	K	L	T	E	A	F	P	V	A	L	.
Template Known Secondary structure							S	S														T									T	T	.	.		S											T	T							S	S		.	.	.	.															S	S				.
Template Predicted Secondary structure																																	.	.																								.	.	.	.																				.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.								.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.
Query Sequence		M	L	G	T	A	A	G	P	H	P	Y	P	T	I	V	R	E	F	Q	R	M	I	G	E	E	T	K	A	Q	I	L	E	R	E	G	R	L	P	D	A	V	I	A	C	V	G	G	G	S	N	A	I	G	M	F	A	D	F	I	N	.	.	.	.	.	.	.	E	T	N	V	G	L	I	G	V	E	P	G	G
Query Conservation																																																														.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																								.	.	.	.																											.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																								.	.	.	.
Template Sequence		.	.	.	.	.	.	.	V	N	S	V	N	P	H	R	L	E	G	Q	K	T	L	A	F	E	V	V	D	E	L	.	.	.	.	G	D	A	P	H	Y	H	A	L	P	V	G	N	A	G	N	I	T	A	H	W	M	G	Y	K	A	Y	H	A	L	G	K	A	K	R	L	P	R	M	L	G	F	Q	A	A	G
Template Known Secondary structure		.	.	.	.	.	.	.		S	T	T	S								T											.	.	.	.	S	S			S							S	S	S																T	T	S		S	S										G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.																								.	.	.	.
Template SS confidence
									153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	I	E	T	G	E	H	G	A	P	L	K	H	G	R	V	G	I	Y	F	G	M	K	A	P	M	M	Q	T	E	D	G	Q	I	E	E	S	Y	S	I	S	A	G	L	D	F	P	S	V	G	P	Q	H	A	Y	L	N	S	T	G	R	A	D	Y	V	S	I	T	D	D	E	A	L	E	A	F	K	T	L
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	P	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	R	P	V	E	R	P	E	T	L	A	T	A	I	R	I	G	N	P	A	S	W	Q	G	A	V	R	A	K	E	E	S	G	G	V	I	E	A	V	T	D	E	E	I	L	F	A	Y	R	Y	L
Template Known Secondary structure		G					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	S			S	S				S		G	G	G			S	S		T	T												T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.																								.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		C	L	H	E	G	I	I	P	A	L	E	S	S	H	A	L	A	H	A	L	K	M	M	R	E	N	P	.	D	K	E	Q	L	L	V	V	N	L	S	G	R	G	D	K	D	I	F	T	V	H	D	I	L	K	A	R	G	E	I
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		A	R	E	E	G	I	F	C	E	P	A	S	A	A	A	M	A	G	V	F	K	L	L	R	E	G	R	L	E	P	E	S	T	V	V	L	T	L	T	G	H	G	L	K	D	P	A	T	A	E	R	V	A	E	L	P	P	P	V
Template Known Secondary structure					T				B																	T	T		S		S	S									B	B	G	G	G		G	G	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions