|   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
50 | . | . | . | . | . | . | . | . | |
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
| . |
|  |  |
|  |  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | M | Y | V | P | Q | I | L | M | P | A | . |
L | R | Q | L | E | E | A | F | V | S | A | Q | K | D | P | E | F | Q | A | Q | F | N | D | L | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | N | Y | A | G | R | P | T | A | . |
L | T | K | C | Q | N | I | T | A | G | T | N | T | T | L | Y | L |
Query Conservation |   |
|
|   |   |   |
|   |   |
|   |   |   | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|
|
| . |
|   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |
|
|   |   |
|
|   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|
Template Sequence |   |
G | G | L | F | I | P | P | T | I | P | Q | V | D | Q | A | T | L | F | N | D | W | S | K | L | S | F | Q | D | L | A | F | A | I | X | R | L | Y | I | A | Q | E | E | I | P | D | A | D | L | K | D | L | I | K | R | S | Y | S | T | F | R | S | D | E | V | T | P | L | V | Q | N | V | T | G | D | K | E | N | L | H | I |
Template Known Secondary structure |   |
S |
|
|  |  |
| S | S |
|
|
|
|
|  |  |  |  |  |  | T | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T | S |
| T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| S | S | T | T | S | S |
|  |  |
|
| T | T |
| S | S | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | |
. | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | R | E | D | L | L | H | G | G | A | H | K | T | N | Q | V | L | G | Q | A | L | L | A | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | M | G | K | T | E | I | I | A | E | T | G | A | G | Q | H | G | V | A | S | A | L | A | . |
S | A | L | L | G | L | K | C | R | I | Y | M | G | A | K | D | V | E | R | Q |
Query Conservation |   |
|   |
|   |
|
|
|
|
|
|   |
|   |
|   |
|   |   |   |
|   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |
|   |   |   |
|
|
|
|   |
|   |
|   |
|   |   | . |
|   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|
|
|
|   |
| . | . |   |
|
|
Template Sequence |   |
L | E | L | F | H | G | P | T | Y | A | F | K | D | V | A | L | Q | F | V | G | N | L | F | E | Y | F | L | Q | R | T | N | A | N | L | P | E | G | E | K | K | Q | I | T | V | V | G | A | T | S | G | D | T | G | S | A | A | I | Y | G | L | R | G | K | K | D | V | S | V | F | I | L | Y | P | T | G | . |
. |
R | I | S |
Template Known Secondary structure |   |
 |  |
|
|
| S | T | T | S | B | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| S | S | S |
|
|
|  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  | T | T |
| T | T |  |  |  |  |  |  |  |  | T | T | . | . | S | S |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
| . | . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
. | . | 190 |
  |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | |
|
|
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | P | N | V | F | R | M | R | L | M | G | A | E | . |
. |
. |
V | I | P | V | H | S | G | S | A | T | L | K | D | A | C | N | E | A | L | R | D | W | S | G | S | Y | E | T | A | H | Y | M | L | G | T | A | A | G | P | H | P | Y | P | T | I | V | R | E | F | Q | R | M | I | G | E | E | T | K | A | Q | I | L | E | R |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|
|
| . | . | . |
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|   |
|   |   |   |   |
|
|   |
|
|   |
|   |
|   | . | . | . | . |
|
|
|
|
|   |   |
|
|   |
|
|   |
|   |   |   | . | . | . | . |   |   |   |
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |
Template Sequence |   |
P | I | Q | E | E | Q | X | T | T | V | P | D | E | N | V | Q | T | L | S | V | T | G | T | . |
. |
. |
. |
F | D | N | C | Q | D | I | V | K | A | I | F | G | D | K | E | F | . |
. |
. |
. |
N | H | N | V | G | A | V | N | S | I | N | W | A | R | I | L | A | Q | X | T | Y | Y | F | Y | S | F | F | Q | A | T | N | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
| T | T |  |  |  |  |  |  | S | S |
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
| . | . | . | . |
|
|
| B |
|
|
|
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
|
|
|
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | |
|
|
|
. | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
  |
  |   |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | |
. | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | R | L | P | D | A | V | I | A | C | V | G | G | G | S | N | A | I | G | M | F | A | D | F | I | N | . |
E | T | N | V | G | L | I | G | V | E | P | G | G | H | G | I | E | T | G | E | H | G | A | P | L | K | H | G | R | V | G | I | Y | F | G | M | K | A | P | M | M | Q | T | E | D | G | Q | I | E | E | S | Y |
Query Conservation |   |
  |
|   |   |
|
|   |
|
|   |   |
|
|   |
|   |   |   |   |
|
|   |   |   |
|   |   | . |   |   |   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|
|
|
|
|
|
|
|   |   |
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|   |   |
|   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
K | D | S | K | K | V | K | F | V | V | P | S | G | N | F | G | D | I | L | A | G | Y | F | A | K | K | X | G | L | P | I | E | K | L | A | I | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | N | E | N | D | I | L | D | R | F | L | K | S | G | L | Y | E | R | S | D | K | V | A | A | T | L |
Template Known Secondary structure |   |
S | S |
|
|
|  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
| S |
|
|  |  |  |  |  |  |  |  | S |  |  |  |
|
| S | S |
|
|
|
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
265 | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . |
  |
  |   |
299 | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | I | S | A | G | L | D | F | P | S | V | G | P | Q | H | A | Y | L | N | S | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | R | A | D | Y | V | S | I | T | D | D | E | A | L | E | A | F | K | T | L |
Query Conservation |   |
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|   |
|   |   |   |   |
|   |   |   |
Template Sequence |   |
S | P | A | X | D | I | L | I | S | S | N | F | E | R | L | L | W | Y | L | A | R | E | Y | L | A | N | G | D | D | L | K | A | G | E | I | V | N | N | W | F | Q | E | L | K | T | N | G | K | F | Q | V | D | K | S | I | I | E | G | A | S | K | D | F | T | S | E | R | V | S | N | E | E | T | S | E | T | I | K | K | I |
Template Known Secondary structure |   |
| G | G | G |
|
| S | S |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |
|
|  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
328 | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . |
  |
  |   |
340 | . | . | |
|
|
|
. | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  | . | . | . | . |
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | L | H | . |
. |
. |
. |
E | G | I | I | P | A | L | E | S | S | H | A | L | A | H | A | L | K | M | M | R | E | N | P | D | K | E | Q | L | L | V | V | N | L | S | G | R | G | D | K | D | I | F | T | V | H | D | I | L | K | A | R | G | E |
Query Conservation |   |
|   |   | . | . | . | . |
|
|
|   |   |   |
|   |
|
|   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |
Template Sequence |   |
Y | E | S | S | V | N | P | K | H | Y | I | L | D | P | H | T | A | V | G | V | C | A | T | E | R | L | I | A | K | D | N | D | K | S | I | Q | Y | I | S | L | S | T | A | H | P | A | K | F | A | D | A | V | N | N | A | L | S | G | F | S | N |
Template Known Secondary structure |   |
 |  |  |
|
| S | S | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T | S |  |  |  |  |  |  |
| B |
| G | G | G | G |  |  |  |  |  |  |  |  | T | T |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
408 | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . |
  |