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Job DescriptionP0A879
Confidence99.97%DateThu Jan 5 11:07:07 GMT 2012
Rank39Aligned Residues357
% Identity12%Templated1kl7a_
SCOP infoTryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.... .....30.........40......... 50........ .60.........70.....
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Query Sequence  GGMYVPQILMPA. LRQLEEAFVSAQKDPEFQAQFNDLL. . . . . . . . . . . . . . . KNYAGRPTA. LTKCQNITAGTNTTLYL
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Template Sequence  GGLFIPPTIPQVDQATLFNDWSKLSFQDLAFAIXRLYIAQEEIPDADLKDLIKRSYSTFRSDEVTPLVQNVTGDKENLHI
Template Known Secondary structure  S


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   33......40.........50.........60.........70.........80.........90.........100.........110..
 
   76...80.........90......... 100.........110.........120.. .......130.........140..
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Query Sequence  KREDLLHGGAHKTNQVLGQALLAK. . . . . . . . . . . . RMGKTEIIAETGAGQHGVASALA. SALLGLKCRIYMGAKDVERQ
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Template Sequence  LELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTG. . RIS
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STTSBTTTS
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   113......120.........130.........140.........150.........160.........170.........180....... ..190
 
   143......150..... ....160.........170.........180.........190.........200.........210.........
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Query Sequence  SPNVFRMRLMGAE. . . VIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILER
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Template Sequence  PIQEEQXTTVPDENVQTLSVTGT. . . . FDNCQDIVKAIFGDKEF. . . . NHNVGAVNSINWARILAQXTYYFYSFFQATNG
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   191........200.........210... ......220.........230 .........240.........250.........260..
 
   220.........230.........240...... ...250.........260.........270.........280.........290........
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Query Sequence  EGRLPDAVIACVGGGSNAIGMFADFIN. ETNVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTEDGQIEESY
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Template Sequence  KDSKKVKFVVPSGNFGDILAGYFAKKXGLPIEKLAIA. . . . . . . . . . . . . . . . . TNENDILDRFLKSGLYERSDKVAATL
Template Known Secondary structure  SS



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   265....270.........280.........290.........300. ........310.........320.......
 
   299300.........310......... 320.........330.........
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Query Sequence  SISAGLDFPSVGPQHAYLNST. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GRADYVSITDDEALEAFKTL
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Template Sequence  SPAXDILISSNFERLLWYLAREYLANGDDLKAGEIVNNWFQELKTNGKFQVDKSIIEGASKDFTSERVSNEETSETIKKI
Template Known Secondary structure 
GGG

SS
TTTSTT
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   328.330.........340.........350.........360.........370.........380.........390.........400.......
 
   340.. .......350.........360.........370.........380.........390......
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Query Sequence  CLH. . . . EGIIPALESSHALAHALKMMRENPDKEQLLVVNLSGRGDKDIFTVHDILKARGE
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Template Sequence  YESSVNPKHYILDPHTAVGVCATERLIAKDNDKSIQYISLSTAHPAKFADAVNNALSGFSN
Template Known Secondary structure 

SSTT





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GGGGTT
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   408.410.........420.........430.........440.........450.........460........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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