Job Description P0A879 Confidence 100.00% Date Thu Jan 5 11:07:07 GMT 2012 Rank 35 Aligned Residues 312 % Identity 18% Template d1j0aa_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.
Predicted Secondary structure												.																																			.	.																																.
Query SS confidence												.																																			.	.																																.
Query Sequence		P	E	F	Q	A	Q	F	N	D	L	.	L	K	N	Y	A	G	R	P	T	A	L	T	K	C	Q	N	I	T	A	G	T	N	T	T	L	Y	L	K	R	E	D	L	L	H	.	.	G	G	A	H	K	T	N	Q	V	L	G	Q	A	L	L	A	K	R	M	G	K	T	E	I	I	A	E	T	G	A	G	.	Q
Query Conservation												.																																			.	.																																.
Alig confidence												.																																			.	.																																.
Template Conservation
Template Sequence		P	K	I	F	A	L	L	A	K	F	P	R	V	E	L	I	P	W	E	T	P	I	Q	Y	L	P	N	I	S	R	E	I	G	A	D	V	Y	I	K	R	D	D	L	T	G	L	G	I	G	G	N	K	I	R	K	L	E	Y	L	L	G	D	A	L	S	K	G	A	D	V	V	I	T	V	G	A	V	H	S	N
Template Known Secondary structure									T	T									S															T	S							G	G	G	S		S	T	T		S	T															T	T		S								T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		H	G	V	A	S	A	L	A	S	A	L	L	G	L	K	C	R	I	Y	M	G	A	K	D	V	E	R	Q	S	P	N	V	F	R	M	R	L	M	G	A	E	V	I	P	V	H	S	G	S	.	A	T	L	K	D	A	C	N	E	A	L	R	D	W	S	G	S	Y	E	T	A	H	Y	M	L	G	T	A	A	G
Query Conservation																																																			.
Alig confidence																														.	.																				.
Template Conservation																														.	.
Template Sequence		H	A	F	V	T	G	L	A	A	K	K	L	G	L	D	A	I	L	V	L	R	G	K	E	E	L	K	G	.	.	N	Y	L	L	D	K	I	M	G	I	E	T	R	V	Y	D	A	K	D	S	F	E	L	M	K	Y	A	E	E	I	A	E	E	L	K	R	E	G	R	K	P	Y	V	I	P	P	G	G	A	S
Template Known Secondary structure													T	T									S				S			.	.								T	T							S			S	T	T	T													T	T	S	S								G	G	G		S
Template Predicted Secondary structure																														.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		P	H	P	Y	P	T	I	V	R	E	F	Q	R	M	I	G	E	E	T	K	A	Q	I	L	E	R	E	G	R	L	P	D	A	V	I	A	C	V	G	G	G	S	N	A	I	G	M	F	A	D	F	I	N	.	E	T	N	V	G	L	I	G	V	E	P	G	G	H	G	I	E	T	G	E	H	G	A	P	L	K
Query Conservation																																																							.
Alig confidence				.	.	.	.	.																	.	.	.	.																											.																								.	.	.
Template Conservation				.	.	.	.	.																	.	.	.	.																																																			.	.	.
Template Sequence		P	I	.	.	.	.	.	G	T	L	G	Y	V	R	A	V	G	E	I	A	T	Q	S	.	.	.	.	E	V	K	F	D	S	I	V	V	A	A	G	S	G	G	T	L	A	G	L	S	L	G	L	S	I	L	N	E	D	I	R	P	V	G	I	A	V	G	R	F	G	E	V	M	T	S	K	L	D	.	.	.
Template Known Secondary structure				.	.	.	.	.			T														.	.	.	.					S							S	S	S													T	T											S	S		S	S	S							.	.	.
Template Predicted Secondary structure				.	.	.	.	.																	.	.	.	.																																																			.	.	.
Template SS confidence
		161	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		H	G	R	V	G	I	Y	F	G	M	K	A	P	M	M	Q	T	E	D	G	Q	I	E	E	S	Y	S	I	S	A	G	L	D	F	P	S	V	G	P	Q	H	A	Y	L	N	S	T	G	R	A	D	Y	V	S	I	T	D	D	E	A	L	E	A	F	K	T	L	C	L	H	E	G	I	I	P	A	L	.	E	S
Query Conservation																																																																															.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	I	K	E	A	A	E	L	L	G	V	K	V	E	V	R	P	E	L	Y	D	Y	S	F	G	E	Y	G	K	I	T	G	E	V	A	Q	I	I	R	K	V	G	T	R	E	G	I	I	L	D	P	V	Y	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T					S								S	T	T	S	T	T																		S					T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																											229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	A	L	A	H	A	L	K	M	M	R	E	N	P	D	K	E	Q	L	L	V	V	N	L	S	G	R	G	D	K	D	I	F	T	V	H	D	I	L
Query Conservation
Alig confidence																.													.
Template Conservation																.													.
Template Sequence		G	K	A	F	Y	G	L	V	D	L	A	R	K	G	.	E	L	G	E	K	I	L	F	I	H	T	G	.	G	I	S	G	T	F	H	Y	G	D	K	L
Template Known Secondary structure														T	T	.		S		S									.								T
Template Predicted Secondary structure																.													.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions