Job Description P0A879 Confidence 43.25% Date Thu Jan 5 11:07:07 GMT 2012 Rank 162 Aligned Residues 109 % Identity 14% Template d1g0da4 SCOP info Cysteine proteinases Cysteine proteinases Transglutaminase core Resolution 2.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.				.
Predicted Secondary structure																																																													.	.	.	.														.	.	.
Query SS confidence																																																													.	.	.	.														.	.	.
Query Sequence		G	M	Y	V	P	Q	I	L	M	P	A	L	R	Q	L	E	E	A	F	V	S	A	Q	K	D	P	E	F	Q	A	Q	F	N	D	L	L	K	N	Y	A	G	R	P	T	A	L	T	K	C	Q	N	I	T	A	G	T	N	T	T	.	.	.	.	L	Y	L	K	R	E	D	L	L	H	G	G	A	.	.	.	H
Query Conservation																																																													.	.	.	.														.	.	.
Alig confidence														.															.	.	.	.	.	.	.	.	.																								.	.	.	.														.	.	.
Template Conservation														.															.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	F	E	D	Y	V	M	D	I	C	F	.	E	V	L	D	N	S	P	A	A	L	K	N	S	E	.	.	.	.	.	.	.	.	.	M	D	I	E	H	R	S	D	P	V	Y	V	G	R	T	I	T	A	M	V	N	S	N	G	D	R	G	V	L	T	G	R	W	E	E	P	Y	T	D	G	V	A	P	Y
Template Known Secondary structure			T	T	S	T	T							.					T	S									.	.	.	.	.	.	.	.	.						T	T														T	T		T	T	T		S						S	S			T	T	S			G	G
Template Predicted Secondary structure														.															.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.										.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	N	Q	V	L	G	Q	A	L	L	A	K	R	M	G	K	T	E	I	I	A	E	T	G	A	G	Q	H	G	V	A	S	A	L	A	S	A	L	L	G	L	K	C	R	I	Y
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		R	W	T	G	S	V	P	I	L	Q	Q	W	S	K	A	G	V	R	P	.	V	K	Y	G	Q	C	W	V	F	A	A	V	A	C	T	V	L	R	C	L	G	I	P	T	R	P	I
Template Known Secondary structure		G		S	B	S										T	T	S			.																					T
Template Predicted Secondary structure																					.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions