Job Description P0A879 Confidence 100.00% Date Thu Jan 5 11:07:07 GMT 2012 Rank 34 Aligned Residues 308 % Identity 16% Template d1f2da_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.00

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.																.	.	.																								.
Query SS confidence																			.	.																.	.	.																								.
Query Sequence		R	P	T	A	L	T	K	C	Q	N	I	T	A	G	T	N	T	.	.	T	L	Y	L	K	R	E	D	L	L	H	G	G	A	H	.	.	.	K	T	N	Q	V	L	G	Q	A	L	L	A	K	R	M	G	K	T	E	I	I	A	E	.	T	G	A	G	Q	H	G	V	A	S	A	L	A	S	A	L	L	G	L
Query Conservation																			.	.																.	.	.																								.
Alig confidence																			.	.																.	.	.																								.
Template Conservation
Template Sequence		G	P	S	P	I	S	N	L	N	R	L	S	Q	H	L	G	S	K	V	N	V	Y	A	K	R	E	D	C	N	S	G	L	A	F	G	G	N	K	L	R	K	L	E	Y	I	V	P	D	I	V	E	G	D	Y	T	H	L	V	S	I	G	G	R	Q	S	N	Q	T	R	M	V	A	A	L	A	A	K	L	G	K
Template Known Secondary structure		S	S													T	T	T		S							G	G	G	S		S	S	T	T									T	T	T							S			S								T	T															T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.									.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.																					.
Query SS confidence																		.	.	.	.	.	.	.	.																					.
Query Sequence		K	C	R	I	Y	M	G	A	K	D	V	E	R	Q	S	P	.	.	.	.	.	.	.	.	N	V	F	R	M	R	L	M	G	A	E	V	I	P	V	H	S	G	S	A	.	T	L	K	D	A	C	N	E	A	L	R	D	W	S	G	S	Y	E	T	A	H	Y	M	L	G	T	A	A	G	P	H	P	Y	P	T
Query Conservation																		.	.	.	.	.	.	.	.																					.
Alig confidence																		.	.	.	.	.	.	.	.																					.																									.	.	.	.
Template Conservation																																																																							.	.	.	.
Template Sequence		K	C	V	L	I	Q	E	D	W	V	P	I	P	E	A	E	K	D	V	Y	N	R	V	G	N	I	E	L	S	R	I	M	G	A	D	V	R	V	I	E	D	G	F	D	I	G	M	R	K	S	F	A	N	A	L	Q	E	L	E	D	A	G	H	K	P	Y	P	I	P	.	.	.	.	A	G	C	S	E	H	K
Template Known Secondary structure											S				G	G	G	T	T	T	T	T	T	S									T	T												S	S															T	T								.	.	.	.	G	G	G	T	T	S	T
Template Predicted Secondary structure																																																																							.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		I	V	R	E	F	Q	R	M	I	G	E	E	T	K	A	Q	I	L	E	R	E	G	R	L	P	D	A	V	I	A	C	V	G	G	G	S	N	A	I	G	M	F	A	D	F	I	N	.	E	T	N	V	G	L	I	G	V	E	P	G	G	H	G	I	E	T	G	E	H	G	A	P	L	K	H	G	R	V	G	I
Query Conservation																																																	.
Alig confidence																						.																											.																										.	.	.	.	.	.	.
Template Conservation																						.																																																					.	.	.	.	.	.	.
Template Sequence		Y	G	G	L	G	F	V	G	F	A	D	E	V	I	N	Q	E	V	E	L	.	G	I	K	F	D	K	I	V	V	C	C	V	T	G	S	T	T	A	G	I	L	A	G	M	A	Q	Y	G	R	Q	D	D	V	I	A	I	D	A	S	F	T	S	E	K	T	K	E	Q	T	L	R	I	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	T	T																	.	T				S							S	S	S											G	G	G	T		G	G	G							S	S													.	.	.	.	.	.	.
Template Predicted Secondary structure																						.																																																					.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		Y	F	G	M	K	A	P	M	M	Q	T	E	D	G	Q	I	E	E	S	Y	S	I	S	A	G	L	D	F	P	S	V	G	P	Q	H	A	Y	L	N	S	T	G	R	A	D	Y	V	S	I	T	D	D	E	A	L	E	A	F	K	T	L	C	L	H	E	G	I	I	P	A	L	E	.	S	S	H	A	L	A	H
Query Conservation																																																																										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																																									.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	N	T	A	K	L	I	G	V	E	H	E	.	F	K	D	F	T	L	D	T	R	F	A	Y	P	C	Y	G	V	P	N	E	G	T	I	E	A	I	R	T	C	A	E	Q	E	G	V	L	T	D	P	V	Y	E	G	K	S	M	Q	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T					.		S							T	T	S	T	T	B	T	T	B																	S					T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
																				242	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		358	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		A	L	K	M	M	R	E	N	P	.	D	K	E	Q	L	L	V	V	N	L	S	G	R	G	D	K	D	I	F	T	V	H	D	I	L	K	A	R
Query Conservation											.
Alig confidence											.													.
Template Conservation																								.
Template Sequence		L	I	A	L	I	K	E	D	Y	F	K	P	G	A	N	V	L	Y	V	H	L	G	.	G	A	P	A	L	S	A	Y	S	S	F	F	P	T	K
Template Known Secondary structure								T	T		S		T	T										.		G	G	G	G	G	G	G	G	G	G
Template Predicted Secondary structure																								.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions