Job Description P0A879 Confidence 100.00% Date Thu Jan 5 11:07:07 GMT 2012 Rank 17 Aligned Residues 309 % Identity 19% Template c3l6cA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:serine racemase; PDBTitle: x-ray crystal structure of rat serine racemase in complex with2 malonate a potent inhibitor Resolution 2.20 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	R	Q	L	E	E	A	F	V	S	A	Q	K	D	P	E	F	Q	A	Q	F	N	D	L	L	K	N	Y	A	G	R	P	T	A	L	T	K	C	Q	N	I	T	A	G	T	N	T	T	L	Y	L	K	R	E	D	L	L	H	G	G	A	H	K	T	N	Q	V	L	G	Q	A	L	L	A	K	R	M	G	K	.
Query Conservation																																																																																	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	D	V	E	K	A	H	L	N	I	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	H	L	T	P	V	L	T	S	S	I	L	N	Q	I	A	G	R	N	L	F	F	K	C	E	L	F	Q	K	T	G	S	F	K	I	R	G	A	L	N	A	I	R	G	L	I	P	D	T	L	E
Template Known Secondary structure													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S																T	S							G	G	G	S	G	G	G	B	T	T												S		S	S	S	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.																.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
				104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	T	E	I	I	A	E	T	G	A	G	Q	H	G	V	A	S	A	L	A	S	A	L	L	G	L	K	C	R	I	Y	M	G	A	K	D	V	E	R	Q	S	P	N	V	F	R	M	R	L	M	G	A	E	V	I	P	V	H	S	G	S	A	T	L	K	D	A	C	N	E	A	L	R	D	W	S	G	S	Y
Query Conservation		.	.
Alig confidence		.	.																																								.	.	.																		.	.	.	.
Template Conservation																																											.	.	.																		.	.	.	.
Template Sequence		G	K	P	K	A	V	V	T	H	S	S	G	N	H	G	Q	A	L	T	Y	A	A	K	L	E	G	I	P	A	Y	I	V	V	P	Q	T	A	P	N	C	K	.	.	.	K	L	A	I	Q	A	Y	G	A	S	I	V	Y	S	E	P	S	.	.	.	.	D	E	S	R	E	N	V	A	Q	R	I	I	Q	E	T
Template Known Secondary structure		T			S							S	S													T	T									T	T	S					.	.	.							T	T								S	S	.	.	.	.
Template Predicted Secondary structure																																											.	.	.																		.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		E	T	A	H	Y	M	L	G	T	A	A	G	P	H	P	Y	P	T	I	V	R	E	F	Q	R	M	I	G	E	E	T	K	A	Q	I	L	E	R	E	G	R	L	P	D	A	V	I	A	C	V	G	G	G	S	N	A	I	G	M	F	A	D	F	I	N	.	E	T	N	V	G	L	I	G	V	E	P	G	G	H
Query Conservation																																																																			.
Alig confidence						.	.	.	.	.	.												.														.	.	.	.	.																										.
Template Conservation						.	.	.	.	.	.												.														.	.	.	.	.
Template Sequence		E	G	I	L	.	.	.	.	.	.	V	H	P	N	Q	E	P	A	V	I	A	.	G	Q	G	T	I	A	L	E	V	L	N	Q	V	.	.	.	.	.	P	L	V	D	A	L	V	V	P	V	G	G	G	G	M	V	A	G	I	A	I	T	I	K	T	L	K	P	S	V	K	V	Y	A	A	E	P	S	N	A
Template Known Secondary structure		T				.	.	.	.	.	.			S	S	S	S						.			T											.	.	.	.	.	T	T									S	S	S															T	T	S								G	G	G
Template Predicted Secondary structure						.	.	.	.	.	.												.														.	.	.	.	.
Template SS confidence
		147	.	.	150							.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	E	T	G	E	H	G	A	P	L	K	H	G	R	V	G	I	Y	F	G	M	K	A	P	M	M	Q	T	E	D	G	Q	I	E	E	S	Y	S	I	S	A	G	L	D	F	P	S	V	G	P	Q	H	A	Y	L	N	S	T	G	R	A	D	Y	V	S	I	T	D	D	E	A	L	E	A	F	K	T	L	C
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Sequence		D	D	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	S	K	L	K	G	E	L	T	P	N	L	H	P	P	E	T	I	A	D	G	V	K	S	S	.	I	G	L	N	T	W	P	I	I	R	D	L	V	D	D	V	F	T	V	T	E	D	E	I	K	Y	A	T	Q	L	V	W
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	S					S	S					S		G	G	G		S		.			T	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template SS confidence
		215	.	.																			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		L	H	E	G	I	I	P	A	L	E	S	S	H	A	L	A	H	A	L	K	M	M	R	E	N	P	.	D	K	E	Q	L	L	V	V	N	L	S	G	R	G	D	K	D	I	F	T	V
Query Conservation																												.
Alig confidence																												.													.
Template Conservation																																									.
Template Sequence		E	R	M	K	L	L	I	E	P	T	A	G	V	G	L	A	A	V	L	S	Q	H	F	Q	T	V	S	P	E	V	K	N	I	C	I	V	L	S	G	.	G	N	V	D	L	T	S	L
Template Known Secondary structure										G	G	G	G							T	S	T	G	G	G	G	S		T	T										B	.					S	S
Template Predicted Secondary structure																																									.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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