Return to main results Retrieve Phyre Job Id

Job DescriptionP0A879
Confidence29.67%DateThu Jan 5 11:07:07 GMT 2012
Rank274Aligned Residues113
% Identity15%Templatec3exaD_
PDB info PDB header:transferaseChain: D: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of the full-length trna2 isopentenylpyrophosphate transferase (bh2366) from3 bacillus halodurans, northeast structural genomics4 consortium target bhr41.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170.........180.........190.........200........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  KCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMI
Query Conservation     
 

              
 





 
         
  

                    
   
  
  
  

Alig confidence 




































































...







Template Conservation   

 
 







 

  

     






 



 








  
   






   
 
  ...

  
   
Template Sequence  KLVAIVGPTAVGKTKTSVXLAKRLNGEVISGDSXQVYRGXDIGTAKITAEEXDGVPHHLIDIKDPSESF. . . SVADFQDL
Template Known Secondary structure 

TTSSTTT

TTTTBTT

TTTT


TT

SSS
B
TTS

...
Template Predicted Secondary structure 


































...
Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.. .......80
 
   209210.........220.........230.........240........
Predicted Secondary structure 













Query SS confidence 







































Query Sequence  GEETKAQILEREGRLPDAVIACVGGGSNAIGMFADFINET
Query Conservation    

  

 
  
  

 

  

 
    

   
    
Alig confidence 










....
























Template Conservation 
   
  
   ....
  







 

 


 
    
Template Sequence  ATPLITEIHER. . . . GRLPFLVGGTGLYVNAVIHQFNLGD
Template Known Secondary structure  T....T



TT




Template Predicted Secondary structure 
....












Template SS confidence 







































   81........90. ........100.........110......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions