Job Description P0A879 Confidence 100.00% Date Thu Jan 5 11:07:07 GMT 2012 Rank 29 Aligned Residues 311 % Identity 19% Template c2zsjB_ PDB info PDB header:lyase Chain: B: PDB Molecule:threonine synthase; PDBTitle: crystal structure of threonine synthase from aquifex aeolicus vf5 Resolution 1.80 Å

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		41	.	.	.	.	.	.	.	.	50									.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure												.	.	.	.	.	.	.	.																						.	.
Query SS confidence												.	.	.	.	.	.	.	.																						.	.
Query Sequence		F	Q	A	Q	F	N	D	L	L	K	.	.	.	.	.	.	.	.	N	Y	A	G	R	P	T	A	L	T	K	C	Q	N	I	T	A	G	T	N	T	.	.	T	L	Y	L	K	R	E	D	L	L	H	G	G	A	H	K	T	N	Q	V	L	G	Q	A	L	L	A	K	R	M	G	K	T	E	I	I	A	E	T
Query Conservation												.	.	.	.	.	.	.	.																						.	.
Alig confidence												.	.	.	.	.	.	.	.																						.	.																																			.
Template Conservation																																																																													.
Template Sequence		I	I	K	Q	Y	K	K	Y	L	P	V	D	E	N	T	P	I	V	T	L	Y	E	G	N	T	P	L	I	E	A	D	N	L	A	R	A	I	G	F	K	G	K	I	Y	L	K	Y	E	G	L	N	P	T	G	S	F	K	D	R	G	M	T	L	A	I	S	K	A	V	E	A	G	K	R	A	.	V	I	C	A
Template Known Secondary structure						S	G	G	G	S	S			T	T	S																							T		S	S							G	G	G	S	T	T	S	B	T															T	T		S		.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	G	Q	H	G	V	A	S	A	L	A	S	A	L	L	G	L	K	C	R	I	Y	M	G	A	K	D	V	E	R	Q	S	P	N	V	F	R	M	R	L	M	G	A	E	V	I	P	V	H	S	G	S	A	T	L	K	D	A	C	N	E	A	L	R	D	W	S	G	S	Y	E	T	A	H	Y	M	L	G	T
Query Conservation
Alig confidence																																			.	.																		.	.	.	.																				.	.	.	.	.
Template Conservation																																			.	.																		.	.	.	.																				.	.	.	.	.
Template Sequence		S	T	G	N	T	S	A	S	A	A	A	Y	A	A	R	A	G	L	R	A	Y	V	L	L	P	K	G	A	V	A	I	G	K	.	.	L	S	Q	A	M	I	Y	G	A	K	V	L	A	I	Q	G	T	.	.	.	.	F	D	D	A	L	N	I	V	R	K	I	G	E	N	F	P	V	E	I	.	.	.	.	.
Template Known Secondary structure			S	S													T	T									T	T	T			G	G	G	.	.	T						T	T							S	S		.	.	.	.															S	S				.	.	.	.	.
Template Predicted Secondary structure																																			.	.																		.	.	.	.																				.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.								.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.
Query Sequence		A	A	G	P	H	P	Y	P	T	I	V	R	E	F	Q	R	M	I	G	E	E	T	K	A	Q	I	L	E	R	E	G	R	L	P	D	A	V	I	A	C	V	G	G	G	S	N	A	I	G	M	F	A	D	F	I	N	.	.	.	.	.	.	.	E	T	N	V	G	L	I	G	V	E	P	G	G	H	G	I	E
Query Conservation																																																										.	.	.	.	.	.	.
Alig confidence		.	.	.																								.	.	.	.																											.	.	.	.	.	.	.
Template Conservation		.	.	.																								.	.	.	.
Template Sequence		.	.	.	V	N	S	V	N	P	Y	R	I	E	G	Q	K	T	A	A	F	E	I	C	D	T	L	.	.	.	.	G	E	A	P	D	Y	H	F	I	P	V	G	N	A	G	N	I	T	A	Y	W	K	G	F	K	I	Y	Y	E	E	G	K	I	T	K	L	P	R	M	M	G	W	Q	A	E	G	A	A	P	I
Template Known Secondary structure		.	.	.		S	T	T		T							T											.	.	.	.	S	S			S							S	S	S																T	T	S		S	S										G	G	G
Template Predicted Secondary structure		.	.	.																								.	.	.	.
Template SS confidence
					155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	E	H	G	A	P	L	K	H	G	R	V	G	I	Y	F	G	M	K	A	P	M	M	Q	T	E	D	G	Q	I	E	E	S	Y	S	I	S	A	G	L	D	F	P	S	V	G	P	Q	H	A	Y	L	N	S	T	G	R	A	D	Y	V	S	I	T	D	D	E	A	L	E	A	F	K	T	L	C	L	H	E
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	Y	P	I	K	N	P	Q	T	I	A	T	A	I	K	I	G	N	P	Y	S	W	K	S	A	L	K	A	A	Q	E	S	G	G	K	I	D	A	V	S	D	S	E	I	L	Y	A	Y	K	L	I	A	S	T	E
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	S			S	S				S		G	G	G			S	S		T	T												T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		228																								.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		G	I	I	P	A	L	E	S	S	H	A	L	A	H	A	L	K	M	M	R	E	N	P	.	D	K	E	Q	L	L	V	V	N	L	S	G	R	G	D	K	D	I	F	T	V	H	D	I	L	K	A
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		G	V	F	C	E	P	A	S	A	A	S	V	A	G	L	I	K	L	V	R	E	G	F	F	K	G	G	E	V	V	T	C	T	L	T	G	N	G	L	K	D	P	D	T	A	I	K	V	C	E	E
Template Known Secondary structure					B		G	G	G	G												T	T				S										B	B	G	G	G								T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions