Job Description P0A879 Confidence 100.00% Date Thu Jan 5 11:07:07 GMT 2012 Rank 31 Aligned Residues 304 % Identity 20% Template c2rkbE_ PDB info PDB header:lyase Chain: E: PDB Molecule:serine dehydratase-like; PDBTitle: serine dehydratase like-1 from human cancer cells Resolution 2.80 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	T	A	L	T	K	C	Q	N	I	T	A	G	T	N	T	T	L	Y	L	K	R	E	D	L	L	H	G	G	A	H	K	T	N	Q	V	L	G	Q	A	L	L	A	K	R	M	G	K	T	E	I	I	A	E	T	G	A	G	Q	H	G	V	A	S	A	L	A	S	A	L	L	G	L	K	C	R	I	Y	M
Query Conservation
Alig confidence																																																								.
Template Conservation																																																								.
Template Sequence		V	V	T	P	L	L	E	S	W	A	L	S	Q	V	A	G	M	P	V	F	L	K	C	E	N	V	Q	P	S	G	S	F	K	I	R	G	I	G	H	F	C	Q	E	M	A	K	K	G	C	R	H	L	V	C	.	S	S	G	G	N	A	G	I	A	A	A	Y	A	A	R	K	L	G	I	P	A	T	I	V	L
Template Known Secondary structure																	T	S							G	G	G	S	T	T	S	B	T															T	T							.				S														T
Template Predicted Secondary structure																																																								.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	K	D	V	E	R	Q	S	P	N	V	F	R	M	R	L	M	G	A	E	V	I	P	V	H	S	G	S	A	T	L	K	D	A	C	N	E	A	L	R	D	W	S	G	S	Y	E	T	A	H	Y	M	L	G	T	A	A	G	P	H	P	Y	P	T	I	V	R	E	F	Q	R	M	I	G	E	E	T	K	A
Query Conservation
Alig confidence										.	.	.																		.	.	.	.																				.	.	.	.	.	.									.
Template Conservation										.	.	.																		.	.	.	.																				.	.	.	.	.	.									.
Template Sequence		P	E	S	T	S	L	Q	V	.	.	.	V	Q	R	L	Q	G	E	G	A	E	V	Q	L	T	G	K	V	.	.	.	.	W	D	E	A	N	L	R	A	Q	E	L	A	K	R	D	G	W	E	N	.	.	.	.	.	.	V	P	P	F	D	H	P	L	.	I	W	K	G	H	A	S	L	V	Q	E	L	K	A
Template Known Secondary structure			T	T						.	.	.							T	T								S	S	.	.	.	.														S	T	T				.	.	.	.	.	.			S	S		S			.
Template Predicted Secondary structure										.	.	.																		.	.	.	.																				.	.	.	.	.	.									.
Template SS confidence
		95	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.							.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		Q	I	L	E	R	E	G	R	L	P	D	A	V	I	A	C	V	G	G	G	S	N	A	I	G	M	F	A	D	F	I	N	.	.	E	T	N	V	G	L	I	G	V	E	P	G	G	H	G	I	E	T	G	E	H	G	A	P	L	K	H	G	R	V	G	I	Y	F	G	M	K	A	P	M	M	Q	T	E	D	G
Query Conservation																																		.	.
Alig confidence				.	.	.	.																											.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	.	.	.	.	R	T	P	P	G	A	L	V	L	A	V	G	G	G	G	L	L	A	G	V	V	A	G	L	L	E	V	G	W	Q	H	V	P	I	I	A	M	E	T	H	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	C	F	N	A	A	I	T	A	G	K	L	V
Template Known Secondary structure			S	.	.	.	.	S	S			S							S	S	S														T		T	T	S								T	T	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	S
Template Predicted Secondary structure				.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.																				.	.	.	.	.	210	.	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.								.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.
Query Sequence		Q	I	E	E	S	Y	S	I	S	A	G	L	D	F	P	S	V	G	P	Q	H	A	Y	L	N	S	T	G	R	A	D	Y	V	S	I	T	D	D	E	A	L	E	A	F	K	T	L	C	L	H	E	G	I	I	P	A	L	E	S	S	H	A	L	A	H	A	L	K	M	M	R	E	.	.	.	.	.	.	.	N
Query Conservation																																																																										.	.	.	.	.	.	.
Alig confidence																																																																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	P	D	I	T	S	V	A	K	S	L	G	A	K	T	V	A	A	R	A	L	E	C	M	Q	V	C	K	I	H	S	E	V	V	E	D	T	E	A	V	S	A	V	Q	Q	L	L	D	D	E	R	M	L	V	E	P	A	C	G	A	A	L	A	A	I	Y	S	G	L	L	R	R	L	Q	A	E	G	C	L
Template Known Secondary structure				S				S	S		G	G	G			S	S								G	G	G	T	S																																								T	S								T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	K	E	Q	L	L	V	V	N	L	S	G	R	G	D	K	D	I	F	T	V	H	D	I	L	K	A	R	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	S	L	T	S	V	V	V	I	V	C	G	G	N	N	I	N	S	R	E	L	Q	A	L	K	T	H	L	G	Q
Template Known Secondary structure			S	S		S								B		S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions