Job Description P0A879 Confidence 100.00% Date Thu Jan 5 11:07:07 GMT 2012 Rank 22 Aligned Residues 292 % Identity 21% Template c2pqmA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cysteine synthase; PDBTitle: crystal structure of cysteine synthase (oass) from entamoeba2 histolytica at 1.86 a resolution Resolution 1.86 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																							.	.	.	.																																			.	.	.
Query SS confidence																							.	.	.	.																																			.	.	.
Query Sequence		L	K	N	Y	A	G	R	P	T	A	L	T	K	C	Q	N	I	T	A	G	T	.	.	.	.	N	T	T	L	Y	L	K	R	E	D	L	L	H	G	G	A	H	K	T	N	Q	V	L	G	Q	A	L	L	A	K	R	M	G	K	.	.	.	T	E	I	I	A	E	T	G	A	G	Q	H	G	V	A	S	A	L
Query Conservation																							.	.	.	.																																			.	.	.
Alig confidence									.														.	.	.	.																																			.	.	.
Template Conservation									.
Template Sequence		I	L	E	T	I	G	G	.	T	P	L	V	E	L	H	G	V	T	E	H	P	R	I	K	K	G	T	R	I	L	V	K	L	E	Y	F	N	P	M	S	S	V	K	D	R	V	G	F	N	I	V	Y	Q	A	I	K	D	G	R	L	K	P	G	M	E	I	I	E	S	T	S	G	N	T	G	I	A	L	C	Q
Template Known Secondary structure		G	G	G	G	S	S		.								G	G	G		S	T	T	S		T	T								G	G	G	S	T	T	S	B	T																T	S	S		T	T								S	S
Template Predicted Secondary structure									.
Template SS confidence
		17	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	A	L	L	G	L	K	C	R	I	Y	M	G	A	K	D	V	E	R	Q	S	P	N	V	F	R	M	R	L	M	G	A	E	V	I	P	V	H	S	G	S	A	T	L	K	D	A	C	N	E	A	L	R	D	W	S	G	S	Y	E	T	A	H	Y	M	L	G	T	A	A	G	P	H	P	Y	P	T	I	V
Query Conservation
Alig confidence																							.	.	.																	.																										.	.	.	.	.									.
Template Conservation																							.	.	.																	.																										.	.	.	.	.									.
Template Sequence		A	G	A	V	F	G	Y	R	V	N	I	A	M	P	S	T	M	S	V	E	R	.	.	.	Q	M	I	M	K	A	F	G	A	E	L	I	L	T	E	G	.	K	K	G	M	P	G	A	I	E	E	V	N	K	M	I	K	E	N	P	G	K	Y	F	V	A	.	.	.	.	.	N	Q	F	G	N	P	D	N	.
Template Known Secondary structure							T									T	T	S					.	.	.							T	T								G	.	G	G																S	T	T	T					.	.	.	.	.		T	T	T					.
Template Predicted Secondary structure																							.	.	.																	.																										.	.	.	.	.									.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		R	E	F	Q	R	M	I	G	E	E	T	K	A	Q	I	L	E	R	E	G	R	L	P	D	A	V	I	A	C	V	G	G	G	S	N	A	I	G	M	F	A	D	F	I	N	.	E	T	N	V	G	L	I	G	V	E	P	G	G	H	G	I	E	T	G	E	H	G	A	P	L	K	H	G	R	V	G	I	Y	F
Query Conservation																																															.
Alig confidence																	.	.	.	.																											.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	A	H	H	Y	T	A	N	E	I	W	E	D	T	.	.	.	.	D	G	E	V	D	I	V	V	S	A	V	G	T	S	G	T	V	I	G	V	A	E	K	L	K	E	K	K	K	G	I	K	I	I	A	V	E	P	E	E	S	A	V	L	E	G	K	A	K	G	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	.	.	.	.	T	T										S	S	S															T	T									G	G	G		T	T	T	T					.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	K	A	P	M	M	Q	T	E	D	G	Q	I	E	E	S	Y	S	I	S	A	G	L	D	F	P	S	V	G	P	Q	H	A	Y	L	N	S	T	G	R	A	D	Y	V	S	I	T	D	D	E	A	L	E	A	F	K	T	L	C	L	H	E	G	I	I	P	A	L	E	S	S	H	A	L	A	H	A	L	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	G	I	Q	G	I	G	A	G	F	I	P	D	.	.	.	I	Y	K	K	E	F	V	D	E	I	I	P	I	K	T	Q	D	A	W	K	M	A	R	A	V	V	K	Y	D	G	I	M	C	G	M	S	S	G	A	A	I	L	A	G	L	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T				S	S			T	.	.	.	T			G	G	G																											B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
																			231	.	.	.	.	.	.	.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	R	E	N	P	D	K	E	Q	L	L	V	V	N	L	S	G	R	G	D	K	D	I	F	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	E	K	P	E	N	E	G	K	T	I	V	I	I	V	P	S	C	G	E	R	Y	L	S	T
Template Known Secondary structure				T	S	G	G	G	T	T									B	B	G	G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions