Job Description P0A879 Confidence 28.42% Date Thu Jan 5 11:07:07 GMT 2012 Rank 292 Aligned Residues 82 % Identity 23% Template c2lc0A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:putative uncharacterized protein tb39.8; PDBTitle: rv0020c_nter structure Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30																								.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure													.															.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence													.															.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		M	T	T	L	L	N	P	Y	F	G	E	.	F	G	G	M	Y	V	P	Q	I	L	M	P	A	L	.	R	Q	L	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	V	S	A	Q	K	D	.	P	E	F	Q	A	Q	F	N	D	L	L	K	N	Y	A	G
Query Conservation													.															.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence													.															.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		L	E	Q	T	V	G	D	A	F	A	R	I	F	G	G	S	I	V	P	Q	E	V	E	A	L	L	R	R	E	A	A	D	G	I	Q	S	L	Q	G	N	R	L	L	A	P	N	E	Y	I	I	T	L	G	V	H	D	F	E	K	L	G	A	D	P	E	L	K	S	T	G	F	A	R	D	L	A	D	Y	I	Q
Template Known Secondary structure			S	S			S	T							T	T	S	S		T														T		B				T	T			B																			S		S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	T	A	L	T	K	C	Q	N	I	T	A	G	T	N	T	T	L	Y	L	K	R	E	D	L	L	H	G	G	A	H	K	T	N
Query Conservation
Alig confidence			.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.
Template Sequence		E	.	.	.	.	.	.	.	Q	G	W	Q	T	Y	G	D	V	V	V	R	F	E	Q	S	S	N	L	H	T	G	Q	F	R	A	R
Template Known Secondary structure			.	.	.	.	.	.	.		T		B		S	S										T	T	S		T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
		95								.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions