Job Description P0A879 Confidence 100.00% Date Thu Jan 5 11:07:07 GMT 2012 Rank 12 Aligned Residues 321 % Identity 20% Template c2gn0A_ PDB info PDB header:lyase Chain: A: PDB Molecule:threonine dehydratase catabolic; PDBTitle: crystal structure of dimeric biodegradative threonine deaminase (tdcb)2 from salmonella typhimurium at 1.7 a resolution (triclinic form with3 one complete subunit built in alternate conformation) Resolution 1.70 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	P	Q	I	L	M	P	A	L	R	Q	L	E	E	A	F	V	S	A	Q	K	D	P	E	F	Q	A	Q	F	N	D	L	L	K	N	Y	A	G	R	P	T	A	L	T	K	C	Q	N	I	T	A	G	T	N	T	T	L	Y	L	K	R	E	D	L	L	H	G	G	A	H	K	T	N	Q	V	L	G	Q	A
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	I	T	Y	D	L	P	V	A	I	E	D	I	L	E	A	K	K	R	L	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	Y	K	T	G	M	P	R	S	N	Y	F	S	E	R	C	K	G	E	I	F	L	K	F	E	N	M	Q	R	T	G	S	F	I	R	G	A	F	N	K	L	S
Template Known Secondary structure							S	S	S													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S							B									T	S							G	G	G	S	G	G	G	B
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.																.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	K	R	M	G	K	T	E	I	I	A	E	T	G	A	G	Q	H	G	V	A	S	A	L	A	S	A	L	L	G	L	K	C	R	I	Y	M	G	A	K	D	V	E	R	Q	S	P	N	V	F	R	M	R	L	M	G	A	E	V	I	P	V	H	S	G	S	A	T	L	K	D	A	C	N	E	A	L	R
Query Conservation
Alig confidence												.																																					.	.	.																		.	.	.	.
Template Conservation												.																																					.	.	.																		.	.	.	.
Template Sequence		S	L	T	E	A	E	K	R	K	G	.	V	V	A	C	S	A	G	N	H	A	Q	G	V	S	L	S	C	A	M	L	G	I	D	G	K	V	V	M	P	K	G	A	P	K	S	K	.	.	.	V	A	A	T	C	D	Y	S	A	E	V	V	L	H	G	D	N	.	.	.	.	F	N	D	T	I	A	K	V	S
Template Known Secondary structure			S							T		.						S	S														T									T	T	S					.	.	.								S								S	S	.	.	.	.
Template Predicted Secondary structure												.																																					.	.	.																		.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		D	W	S	G	S	Y	E	T	A	H	Y	M	L	G	T	A	A	G	P	H	P	Y	P	T	I	V	R	E	F	Q	R	M	I	G	E	E	T	K	A	Q	I	L	E	R	E	G	R	L	P	D	A	V	I	A	C	V	G	G	G	S	N	A	I	G	M	F	A	D	F	I	N	.	E	T	N	V	G	L	I	G
Query Conservation																																																																									.
Alig confidence												.	.	.	.	.	.										.																		.	.	.	.	.																								.
Template Conservation												.	.	.	.	.	.										.																		.	.	.	.	.
Template Sequence		E	I	V	E	T	E	G	R	I	F	.	.	.	.	.	.	I	P	P	Y	D	D	P	K	V	.	I	A	G	Q	G	T	I	G	L	E	I	M	E	D	L	Y	D	.	.	.	.	.	V	D	N	V	I	V	P	I	G	G	G	G	L	I	A	G	I	A	I	A	I	K	S	I	N	P	T	I	K	V	I	G
Template Known Secondary structure												.	.	.	.	.	.			S	S	S	S				.																T	T	.	.	.	.	.									S	S	S															T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.										.																		.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	P	G	G	H	G	I	E	T	G	E	H	G	A	P	L	K	H	G	R	V	G	I	Y	F	G	M	K	A	P	M	M	Q	T	E	D	G	Q	I	E	E	S	Y	S	I	S	A	G	L	D	F	P	S	V	G	P	Q	H	A	Y	L	N	S	T	G	R	A	D	Y	V	S	I	T	D	D	E	A	L	E
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	A	E	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	M	A	A	S	Y	Y	T	G	E	I	T	T	H	R	T	T	G	T	L	A	D	G	C	D	V	S	R	P	G	N	L	T	Y	E	I	V	R	E	L	V	D	D	I	V	L	V	S	E	D	E	I	R	N
Template Known Secondary structure					T	T	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	S						S	S			S		G	G	G			S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.																				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	K	T	L	C	L	H	E	G	I	I	P	A	L	E	S	S	H	A	L	A	H	A	L	K	M	M	R	E	N	P	D	K	E	Q	L	L	V	V	N	L	S	G	R	G	D	K	D	I	F	T	V	H	D	I	L
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		S	M	I	A	L	I	Q	R	N	K	V	I	T	E	G	A	G	A	L	A	C	A	A	L	L	S	G	K	L	D	S	H	I	Q	N	R	K	T	V	S	I	I	S	G	.	G	N	I	D	L	S	R	V	S	Q	I	T
Template Known Secondary structure																T	G	G	G									T	T	T					T	T	S								B	.
Template Predicted Secondary structure																																														.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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