Job Description P0A879 Confidence 100.00% Date Thu Jan 5 11:07:07 GMT 2012 Rank 11 Aligned Residues 301 % Identity 22% Template c1jbqD_ PDB info PDB header:lyase Chain: D: PDB Molecule:cystathionine beta-synthase; PDBTitle: structure of human cystathionine beta-synthase: a unique pyridoxal 5'-2 phosphate dependent hemeprotein Resolution 2.60 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																								.	.																																			.	.	.
Query SS confidence																								.	.																																			.	.	.
Query Sequence		L	K	N	Y	A	G	R	P	T	A	L	T	K	C	Q	N	I	T	A	G	T	N	.	.	T	T	L	Y	L	K	R	E	D	L	L	H	G	G	A	H	K	T	N	Q	V	L	G	Q	A	L	L	A	K	R	M	G	K	T	.	.	.	E	I	I	A	E	T	G	A	G	Q	H	G	V	A	S	A	L	A	S
Query Conservation																								.	.																																			.	.	.
Alig confidence									.															.	.																																			.	.	.
Template Conservation									.
Template Sequence		I	L	K	K	I	G	D	.	T	P	M	V	R	I	N	K	I	G	K	K	F	G	L	K	C	E	L	L	A	K	C	E	F	F	N	A	G	G	S	V	K	D	R	I	S	L	R	M	I	E	D	A	E	R	D	G	T	L	K	P	G	D	T	I	I	E	P	T	S	G	N	T	G	I	G	L	A	L	A	A
Template Known Secondary structure		G	G	G	G	S	S		.								S					T	T			S							G	G	G	S	T	T	S	B	T																T		S		T	T								S	S
Template Predicted Secondary structure									.
Template SS confidence
		80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	G	L	K	C	R	I	Y	M	G	A	K	D	V	E	R	Q	S	P	N	V	F	R	M	R	L	M	G	A	E	V	I	P	V	H	S	G	S	A	T	L	K	D	A	C	N	E	A	L	R	D	W	S	G	S	Y	E	T	A	H	Y	M	L	G	T	A	A	G	P	H	P	Y	P	T	I	V	R	E
Query Conservation
Alig confidence																					.	.	.																	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																					.	.	.																	.	.	.	.	.	.																				.	.	.	.	.
Template Sequence		A	V	R	G	Y	R	C	I	I	V	M	P	E	K	M	S	S	E	K	.	.	.	V	D	V	L	R	A	L	G	A	E	I	V	R	T	P	T	.	.	.	.	.	.	E	S	H	V	G	V	A	W	R	L	K	N	E	I	P	N	S	H	I	.	.	.	.	.	L	D	Q	Y	R	N	A	S	N	P	L	A
Template Known Secondary structure					T									S							.	.	.							T	T									.	.	.	.	.	.														S	T	T				.	.	.	.	.			T	T	T		T
Template Predicted Secondary structure																					.	.	.																	.	.	.	.	.	.																				.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.						.	.	.	.	.	.	.	220	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		F	Q	R	M	I	G	E	E	T	K	A	Q	I	L	E	R	E	G	R	L	P	D	A	V	I	A	C	V	G	G	G	S	N	A	I	G	M	F	A	D	F	I	N	.	E	T	N	V	G	L	I	G	V	E	P	G	G	H	G	I	E	T	G	E	H	G	A	P	L	K	H	G	R	V	G	I	Y	F	G	M
Query Conservation																																													.
Alig confidence															.	.	.	.																											.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	Y	D	T	T	A	D	E	I	L	Q	Q	C	.	.	.	.	D	G	K	L	D	M	L	V	A	S	V	G	T	G	G	T	I	T	G	I	A	R	K	L	K	E	K	C	P	G	C	R	I	I	G	V	D	P	E	G	S	I	L	A	E	P	E	E	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T										.	.	.	.	T	T										S	S	S															T	T									T	T		S		S	S	S	G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.					.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	P	M	M	Q	T	E	D	G	Q	I	E	E	S	Y	S	I	S	A	G	L	D	F	P	S	V	G	P	Q	H	A	Y	L	N	S	T	G	R	A	D	Y	V	S	I	T	D	D	E	A	L	E	A	F	K	T	L	C	L	H	E	G	I	I	P	A	L	E	S	S	H	A	L	A	H	A	L	K	M	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	Q	T	E	Q	T	T	Y	E	V	E	G	I	G	Y	D	F	I	P	T	V	.	.	.	L	D	R	T	V	V	D	K	W	F	K	S	N	D	E	E	A	F	T	F	A	R	M	L	I	A	Q	E	G	L	L	C	G	G	S	A	G	S	T	V	A	V	A	V	K	A	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.			S					S			S				S	S			T	T	.	.	.			G	G	G																							T				B															G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																					.	.	.
Template SS confidence
												295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.			.	.	390	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		R	E	N	P	D	K	E	Q	L	L	V	V	N	L	S	G	R	G	D	K	D	I	F	T	V	.	.	H	D	I	L	K	A	R	G
Query Conservation																											.	.
Alig confidence					.																						.	.
Template Conservation					.
Template Sequence		Q	E	L	.	Q	E	G	Q	R	C	V	V	I	L	P	D	S	V	R	N	Y	M	T	K	F	L	S	D	R	W	M	L	Q	K	G
Template Known Secondary structure		G	G		.		T	T									B	B	G	G	G	G	T	T	T	T	T								T	T
Template Predicted Secondary structure					.
Template SS confidence
		362	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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