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Job DescriptionP03819
Confidence96.93%DateThu Jan 5 10:58:01 GMT 2012
Rank127Aligned Residues142
% Identity12%Templatec8ldhA_
PDB info PDB header:oxidoreductase(choh(d)-nad(a))Chain: A: PDB Molecule:m4 apo-lactate dehydrogenase; PDBTitle: refined crystal structure of dogfish m4 apo-lactate2 dehydrogenase
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   393......400.........410.........420... ......430.........440 .........450.........460..
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Query Sequence  DEIDEEQPRVIIAGFGRFGQITGRLLLSSGV. . KMVVLDHDPDHIETLRK. . . . . . . . FGMKVFYGDATRMDLLESAGAA
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Template Sequence  SQEPRSYNKITVVGVGAVGMACAISILMKDLADEVALVDVMEDKLKGEMMDLQHGSLFLHTAKIVSGKDYSV. . . . . . SA
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   14.....20.........30.........40.........50.........60.........70.........80..... ..
 
   463......470.... .....480.........490.........500...... ...510. ........520..
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Query Sequence  KAEVLINAIDDP. . . . . . . . . . . . . . . QTNLQLTEMVKEHFPHLQIIARARDVDHYIRL. . RQAGV. . . EKPERETFEGA
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Template Sequence  GSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCIILVVSNPVDVLTYVAWKLSGLPMHRIIGSGCNLDS
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   523......530.........540
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Query Sequence  LKTGRLALESLGLGPYEA
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Template Sequence  ARFRYLMGERLGVHSCSC
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   168.170.........180.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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