Job Description P03819 Confidence 95.24% Date Thu Jan 5 10:58:01 GMT 2012 Rank 315 Aligned Residues 98 % Identity 15% Template c3uuwB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase with nad(p)-binding rossmann-fold PDBTitle: 1.63 angstrom resolution crystal structure of dehydrogenase (mvim)2 from clostridium difficile. Resolution 1.63 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		401	.	.	.	.	.	.	.	.	410	.	.	.	.		.	.	.	.	.	420	.		.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.	440	.		.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure																.								.								.														.
Query SS confidence																.								.								.														.
Query Sequence		R	V	I	I	A	G	F	G	R	F	G	Q	I	T	.	G	R	L	L	L	S	S	.	G	V	K	M	V	V	L	.	D	H	D	P	D	H	I	E	T	L	R	K	F	.	G	M	K	V	F	Y	G	D	A	T	R	M	D	L	L	E	S	A	G	A	A	K	A	E	V	L	I	N	A	I	D	D	P	Q	T
Query Conservation																.								.								.														.
Alig confidence																.								.								.														.						.	.	.	.								.	.	.	.
Template Conservation																																																				.	.	.	.								.	.	.	.
Template Sequence		K	M	G	M	I	G	L	G	S	I	A	Q	K	A	Y	L	P	I	L	T	K	S	E	R	F	E	F	V	G	A	F	T	P	N	K	V	K	R	E	K	I	C	S	D	Y	R	I	M	P	F	.	.	.	.	D	S	I	E	S	L	A	.	.	.	.	K	K	C	D	C	I	F	L	H	S	S	T	E	T	H
Template Known Secondary structure									S							T					T	S		S	S	S								S													T			B		.	.	.	.	S	S						.	.	.	.	T	T		S
Template Predicted Secondary structure																																																				.	.	.	.								.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.				.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		N	L	Q	L	T	E	M	V	K	E	H	F	P	H	L	Q	I	I	A	R	.	.	.	A	R	D	V	D	H	Y	I	R	L	R	Q	A
Query Conservation																						.	.	.
Alig confidence											.	.	.									.	.	.
Template Conservation											.	.	.
Template Sequence		Y	E	I	I	K	I	L	L	N	.	.	.	L	G	V	H	V	Y	V	D	K	P	L	A	S	T	V	S	Q	G	E	E	L	I	E	L
Template Known Secondary structure											.	.	.	T	T							S	S	S	S	S	S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions