Job Description P03819 Confidence 99.39% Date Thu Jan 5 10:58:01 GMT 2012 Rank 14 Aligned Residues 207 % Identity 11% Template c3u6nC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:high-conductance ca2+-activated k+ channel protein; PDBTitle: open structure of the bk channel gating ring Resolution 3.61 Å

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		401	.	.	.	.	.	.	.	.	410	.			.	.	.	.	.	.	.						.	420	.	.	.	.	.	.	.	.				.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.			.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.								.	.	.	.	.											.	.	.																				.	.
Query SS confidence													.	.								.	.	.	.	.											.	.	.																				.	.
Query Sequence		R	V	I	I	A	G	F	G	R	F	G	.	.	Q	I	T	G	R	L	L	.	.	.	.	.	L	S	S	G	V	K	M	V	V	L	.	.	.	D	H	D	P	D	H	I	E	T	L	R	K	F	G	M	K	V	F	Y	.	.	G	D	A	T	R	M	D	L	L	E	S	A	G	A	A	K	A	E	V	L	I
Query Conservation													.	.								.	.	.	.	.											.	.	.																				.	.
Alig confidence													.	.								.	.	.	.	.											.	.	.																				.	.
Template Conservation
Template Sequence		H	I	V	V	C	G	H	I	T	L	E	S	V	S	N	F	L	K	D	F	L	H	K	D	R	D	D	V	N	V	E	I	V	F	L	H	N	I	S	P	N	L	E	L	E	A	L	F	K	R	H	F	T	Q	V	E	F	Y	Q	G	S	V	L	N	P	H	D	L	A	R	V	K	I	E	S	A	D	A	C	L
Template Known Secondary structure								S														S	S	S	S	S			T	T									S															T	T						S		T	T								T	T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		469	470	.	.	.									.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510							.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Query Sequence		N	A	I	D	D	.	.	.	.	.	.	.	.	P	Q	T	N	L	Q	L	T	E	M	V	K	E	H	F	P	H	L	Q	I	I	A	R	A	R	D	V	D	H	Y	I	R	L	R	Q	A	G	.	.	.	.	.	.	V	E	K	P	E	R	E	T	F	E	G	A	L	K	T	G	R	L	A	L	E	S	L	G
Query Conservation							.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.																																						.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		I	L	A	N	K	Y	C	A	D	P	D	A	E	D	A	S	N	I	M	R	V	I	S	I	K	N	Y	H	P	K	I	R	I	I	T	Q	M	L	Q	Y	H	N	K	A	H	L	L	N	I	P	S	W	N	W	K	E	G	D	D	A	I	C	L	A	E	L	K	A	G	F	I	A	Q	S	C	.	.	.	.	.
Template Known Secondary structure						T	T		S																					S	S								S	S							G	G	G	S	T	T			T	T	T	T																			.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550													.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	P	Y	E	A	R	E	R	A	D	V	F	R	R	F	.	.	.	.	.	.	.	.	.	.	.	.	N	I	Q	M	V	E	E	M	A	M	V	E	N	D	T	K	A	R	A	A	V	Y	K	R	T	S	A	M	L	S	E	I	I	T	E	D	R	E	H	L	S	L	I	Q	R	H	G	W	Q	G	T	E
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	Q	G	L	S	T	M	L	A	N	L	F	S	M	R	S	Y	I	K	I	E	E	D	T	W	Q	K	Y	Y	L	E	G	V	A	N	E	M	Y	T	E	Y	L	S	S	A	F	V	G	L	S	F	P	T	V	C	E	L	C	Y	V	K	L	K	L	L	L	I	A	I	E	Y	K	K	R	I	L	I	N	P
Template Known Secondary structure			S	T	T								T	T	S								S	S		S										T										G	G	G	T	T	S	B												S																S
Template Predicted Secondary structure
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
		603	.	.	.	.	.	.	610	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	K	H	T	G	N	M	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	H	V	K	M	Q	E	G	T
Template Known Secondary structure			T	T		B			S	S
Template Predicted Secondary structure
Template SS confidence
		588	.	590	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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