Job Description P03819 Confidence 95.63% Date Thu Jan 5 10:58:01 GMT 2012 Rank 270 Aligned Residues 136 % Identity 15% Template c3p7mC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:malate dehydrogenase; PDBTitle: structure of putative lactate dehydrogenase from francisella2 tularensis subsp. tularensis schu s4 Resolution 2.20 Å

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		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.										.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.																						.	.	.	.	.	.	.	.	.
Query SS confidence																											.																						.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	R	V	I	I	A	G	F	G	R	F	G	Q	I	T	G	R	L	L	L	S	S	G	V	.	K	M	V	V	L	D	H	D	P	D	H	I	E	T	L	R	K	F	G	M	K	.	.	.	.	.	.	.	.	.	V	F	Y	G	D	A	T	R	M	D	L	L	E	S	A	G	A	A	K	A	E	V	L	I
Query Conservation																											.																						.	.	.	.	.	.	.	.	.
Alig confidence																											.																						.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.
Template Sequence		R	K	K	I	T	L	V	G	A	G	N	I	G	G	T	L	A	H	L	A	L	I	K	Q	L	G	D	V	V	L	F	D	I	A	Q	G	X	P	N	G	K	A	L	D	L	L	Q	T	C	P	I	E	G	V	D	F	K	V	R	G	T	N	D	Y	K	D	.	.	.	.	.	.	L	E	N	S	D	V	V	I
Template Known Secondary structure											S													T	T									S	S	S	S											T	T					T									S		G	G	G	.	.	.	.	.	.	G	T	T		S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.	.	.	.	.	.
		469	470	.	.	.	.	.	.	.																.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.			.	.	.	.	.	.	.	510				.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.									.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.									.	.	.
Query Sequence		N	A	I	D	D	P	Q	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	L	T	E	M	V	K	E	H	F	P	H	L	Q	I	I	A	R	A	R	D	V	D	H	.	.	Y	I	R	L	R	Q	A	G	.	.	.	V	E	K	P	E	R	E	T	F	E	G	A	L	K	T	G	R	L
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.									.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.									.	.	.
Template Conservation
Template Sequence		V	T	A	G	V	P	R	K	P	G	X	S	R	D	D	L	L	G	I	N	I	K	V	X	Q	T	V	G	E	G	I	K	H	N	C	P	N	A	F	V	I	C	I	T	N	P	L	D	I	X	V	N	X	L	Q	K	F	S	G	V	P	D	N	K	I	V	G	X	A	G	V	L	D	S	A	R	F	R	T	F
Template Known Secondary structure					S					T	T																										T	T	S							S	S																G	G	G
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		529	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	S	L	G	L	G	P	Y	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	D	E	L	N	V	S	V	Q	Q	V
Template Known Secondary structure							T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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