 |
Job Description | P03819 | Confidence | 96.19% | Date | Thu Jan 5 10:58:01 GMT 2012 |
Rank | 208 | Aligned Residues | 107 |
% Identity | 21% | Template | c3oh8A_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:nucleoside-diphosphate sugar epimerase (sula family); |
PDBTitle: crystal structure of the nucleoside-diphosphate sugar epimerase from2 corynebacterium glutamicum. northeast structural genomics consortium3 target cgr91
|
Resolution | 2.00 Å |
|
 |
  |   |
378 | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | |
. | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | R | L | E | Q | S | S | T | E | E | A | R | E | A | D | E | I | D | E | E | Q | P | R | V | I | I | A | G | F | . |
G | R | F | G | Q | I | T | G | R | L | L | L | S | S | G | V | K | M | V | V | L | D | H | D | P | D | H | I | E | T | L | R | K | F | G | M | K | V | F | Y | G | D | A | T | R | M | D | L | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   | . |
|   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|
|   |
|   |   |
|   |
|   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |
|   |   |   |   | . | . | . |
Template Sequence |   |
Q | T | Q | L | I | E | D | L | K | F | L | S | R | T | S | T | L | F | D | G | S | P | L | T | V | A | I | T | G | S | R | G | L | V | G | R | A | L | T | A | Q | L | Q | T | G | G | H | E | V | I | Q | L | V | R | K | E | . |
. |
. |
. |
. |
. |
. |
. |
P | K | P | G | K | R | F | W | D | P | L | N | P | . |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|
|
|
|
|  |  |  |  |  | S | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S | S | S | . | . | . | . | . | . | . | . |
|
| T | T |
|  |  |
|
| T | T | S |
| . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |
|
|
|
|
|
| . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 190 | . | . | . | . | |
|
|
  |
  |   |
457 | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | S | A | G | A | A | K | A | E | V | L | I | N | A | I | D | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | Q | T | N | L | Q | L | T | E | M | V | K | E | H | F | P | H | L | Q | I | I | A |
Query Conservation |   |
  |   |
|
|
|   |   |
|   |   |
|
|   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |
|   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
A | S | D | L | L | D | G | A | D | V | L | V | H | L | A | G | E | F | N | D | S | H | K | E | A | I | R | E | S | R | V | L | P | T | K | F | L | A | E | L | V | A | E | S | T | Q | C | T | T | X | I | S |
Template Known Secondary structure |   |
| T | T | T | T | T | T |
| S |  |  |  |  |
|
|
|
|
|
| G | G | G |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|