Job Description P03819 Confidence 99.31% Date Thu Jan 5 10:58:01 GMT 2012 Rank 15 Aligned Residues 130 % Identity 15% Template c3mt5A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:potassium large conductance calcium-activated channel, PDBTitle: crystal structure of the human bk gating apparatus Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		401	.	.	.	.	.	.	.	.	410	.	.			.	.	.	.	.	.						.	420	.	.	.	.	.	.	.	.				.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.			.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.							.	.	.	.	.											.	.	.																				.	.
Query SS confidence														.	.							.	.	.	.	.											.	.	.																				.	.
Query Sequence		R	V	I	I	A	G	F	G	R	F	G	Q	.	.	I	T	G	R	L	L	.	.	.	.	.	L	S	S	G	V	K	M	V	V	L	.	.	.	D	H	D	P	D	H	I	E	T	L	R	K	F	G	M	K	V	F	Y	.	.	G	D	A	T	R	M	D	L	L	E	S	A	G	A	A	K	A	E	V	L	I
Query Conservation														.	.							.	.	.	.	.											.	.	.																				.	.
Alig confidence														.	.							.	.	.	.	.											.	.	.																				.	.
Template Conservation
Template Sequence		H	I	V	V	C	G	H	I	T	L	E	S	V	S	N	F	L	K	D	F	L	H	K	D	R	D	D	V	N	V	E	I	V	F	L	H	N	I	S	P	N	L	E	L	E	A	L	F	K	R	H	F	T	Q	V	E	F	Y	Q	G	S	V	L	N	P	H	D	L	A	R	V	K	I	E	S	A	D	A	C	L
Template Known Secondary structure								S																		T	T	T	T	T								S	S								T	T						S	S								T	T	S							T	T	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		469	470	.	.									.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510							.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure						.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Query Sequence		N	A	I	D	.	.	.	.	.	.	.	.	D	P	Q	T	N	L	Q	L	T	E	M	V	K	E	H	F	P	H	L	Q	I	I	A	R	A	R	D	V	D	H	Y	I	R	L	R	Q	A	G	.	.	.	.	.	.	V	E	K	P	E	R	E	T	F	E	G	A	L	K	T	G	R	L	A	L
Query Conservation						.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	A	N	K	Y	C	A	D	P	D	A	E	D	A	S	N	I	M	R	V	I	S	I	K	N	Y	H	P	K	I	R	I	I	T	Q	M	L	Q	Y	H	N	K	A	H	L	L	N	I	P	S	W	N	W	K	E	G	D	D	A	I	C	L	A	E	L	K	L	G	F	I	A	Q	S	C	L
Template Known Secondary structure						T	T		S																					T	T	S							S						G	G	G	G	G	S	T	T			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions