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Job Description | P03819 | Confidence | 96.06% | Date | Thu Jan 5 10:58:01 GMT 2012 |
Rank | 224 | Aligned Residues | 101 |
% Identity | 14% | Template | c3m2tA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:probable dehydrogenase; |
PDBTitle: the crystal structure of dehydrogenase from chromobacterium2 violaceum
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Resolution | 2.30 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
R | V | I | I | A | G | F | G | R | F | G | Q | I | . |
T | G | R | L | L | L | S | S | . |
G | V | K | M | V | V | L | . |
D | H | D | P | D | H | I | E | T | L | R | K | F | . |
G | M | K | V | F | Y | G | D | A | T | R | M | D | L | L | E | S | A | G | A | A | K | A | E | V | L | I | N | A | I | D | D | P | Q | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | V | G | L | V | G | I | G | A | Q | X | Q | E | N | L | L | P | S | L | L | Q | X | Q | D | I | R | I | V | A | A | C | D | S | D | L | E | R | A | R | R | V | H | R | F | I | S | D | I | P | V | L | D | N | V | . |
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P | A | X | L | N | Q | . |
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V | P | L | D | A | V | V | X | A | G | P | P | Q | L | H |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
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. | 60 | . | . | . | . | |
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477 | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | L | Q | L | T | E | M | V | K | E | H | F | P | H | L | Q | I | I | A | R | . |
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A | R | D | V | D | H | Y | I | R | L | R | Q | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | E | X | G | L | L | A | X | S | . |
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K | G | V | N | V | F | V | E | K | P | P | C | A | T | L | E | E | L | E | T | L | I | D | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . | . | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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80 | . | . | . | . | . | . | . | . | |
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. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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