Job Description P03819 Confidence 96.02% Date Thu Jan 5 10:58:01 GMT 2012 Rank 230 Aligned Residues 136 % Identity 10% Template c3fi9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from porphyromonas2 gingivalis Resolution 1.90 Å

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		399	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440								.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																		.	.																		.	.	.	.	.	.	.
Query SS confidence										.																		.	.																		.	.	.	.	.	.	.
Query Sequence		Q	P	R	V	I	I	A	G	.	F	G	R	F	G	Q	I	T	G	R	L	L	L	S	S	G	V	.	.	K	M	V	V	L	D	H	D	P	D	H	I	E	T	L	R	K	.	.	.	.	.	.	.	F	G	M	K	V	F	Y	G	D	A	T	R	M	D	L	L	E	S	A	G	A	A	K	A	E	V	L	I
Query Conservation										.																		.	.																		.	.	.	.	.	.	.
Alig confidence										.																		.	.																		.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.
Template Sequence		E	E	K	L	T	I	V	G	A	A	G	M	I	G	S	N	M	A	Q	T	A	A	M	M	R	L	T	P	N	L	C	L	Y	D	P	F	A	V	G	L	E	G	V	A	E	E	I	R	H	C	G	F	E	G	L	N	L	T	F	T	S	D	I	K	E	A	.	.	.	.	.	.	L	T	D	A	K	Y	I	V
Template Known Secondary structure		S	S						S	T	T	S													T	T			S							S																		T	T							S						.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																																																				.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.
		469	470	.	.	.	.	.	.	.	.	.	480	.									.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500						.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		N	A	I	D	D	P	Q	T	N	L	Q	L	T	.	.	.	.	.	.	.	.	E	M	V	K	E	H	F	P	H	L	Q	I	I	A	R	A	R	D	V	.	.	.	.	.	D	H	Y	I	R	L	R	Q	A	G	V	E	K	P	E	R	E	T	F	E	G	A	L	K	T	G	R	L	A	L	E	S	L	G	L
Query Conservation															.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		S	S	G	G	T	R	E	D	L	L	K	G	N	A	E	I	A	A	Q	L	G	K	D	I	K	S	Y	C	P	D	C	K	H	V	I	I	I	F	N	P	A	D	I	T	G	L	V	T	L	I	Y	S	G	L	K	P	S	Q	V	T	T	L	A	G	L	D	S	T	R	L	Q	S	E	L	A	K	H	F	G	I
Template Known Secondary structure																														T	T								S	S	S													T			G	G	G																					T	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		536	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	Y	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	S	L	V
Template Known Secondary structure			G	G	G
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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