Job Description P03819 Confidence 95.42% Date Thu Jan 5 10:58:01 GMT 2012 Rank 296 Aligned Residues 162 % Identity 20% Template c3aogA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase (gdhb) from thermus2 thermophilus (glu bound form) Resolution 2.10 Å

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		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.												430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	E	Q	P	R	V	I	I	A	G	F	G	R	F	G	Q	I	T	G	R	L	L	L	S	S	G	V	K	M	V	V	L	D	.	.	.	.	.	.	.	.	.	.	.	H	D	P	D	H	I	E	T	L	R	K	F	G	M	K	V	F	Y	G	D	A	T	R	M	D	L	L	E	S	A	G	A	A	K	A
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	E	G	A	R	V	A	I	Q	G	F	G	N	V	G	N	A	A	A	R	A	F	H	D	H	G	A	R	V	V	A	V	Q	D	H	T	G	T	V	Y	N	E	A	G	I	D	P	Y	D	L	L	R	H	V	Q	E	F	G	G	V	R	G	Y	P	K	A	E	P	L	P	A	A	D	F	W	G	L	P	V
Template Known Secondary structure			S	T	T									S													T	T									S	S						T	T														T	S	S	S	T	T		T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.					500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.							.	.	.
Predicted Secondary structure																																					.	.	.	.																																	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.																																	.	.	.	.	.	.
Query Sequence		E	V	L	I	N	A	I	D	D	P	Q	T	N	L	Q	L	T	E	M	V	K	E	H	F	P	H	L	Q	I	I	A	R	A	R	D	.	.	.	.	V	D	H	Y	I	R	L	R	Q	A	G	V	E	K	P	E	R	E	T	F	E	G	A	L	K	T	G	R	L	A	L	E	.	.	.	.	.	.	S	L	G
Query Conservation																																					.	.	.	.																																	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.											.	.	.	.													.																				.	.	.	.	.	.
Template Conservation																						.	.	.	.	.																											.
Template Sequence		E	F	L	V	P	A	A	L	E	K	Q	I	T	E	Q	N	A	W	R	I	.	.	.	.	.	R	A	R	I	V	A	E	G	A	N	G	P	T	T	P	A	A	D	D	I	L	L	E	K	G	V	.	L	V	V	P	D	V	I	A	N	A	G	G	V	T	V	S	Y	F	E	W	V	Q	D	F	N	S	Y	F
Template Known Secondary structure		S						S	S	S	S		B		T	T	T	G	G	G		.	.	.	.	.			S						S	S	S		B												T		.									T	T														T	T	T
Template Predicted Secondary structure																						.	.	.	.	.																											.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.						.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	P	Y	E	A	R	E	R	A	D	V	F	R	R	F	N	I	Q	M	V	E	E	M	A	M	V	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	T	E	E	E	I	N	A	R	L	E	R	V	L	R	N	A	F	E	A	V	W	Q	V	A	Q	E	K	K
Template Known Secondary structure																														T
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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