Job Description P03819 Confidence 96.24% Date Thu Jan 5 10:58:01 GMT 2012 Rank 203 Aligned Residues 132 % Identity 21% Template c2v6bB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:l-lactate dehydrogenase; PDBTitle: crystal structure of lactate dehydrogenase from deinococcus2 radiodurans (apo form) Resolution 2.50 Å

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		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.			.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440										.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.																			.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.																			.	.	.	.	.	.	.	.	.
Query Sequence		R	V	I	I	A	G	F	G	R	F	G	Q	I	T	G	R	L	L	L	S	S	G	.	.	V	K	M	V	V	L	D	H	D	P	D	H	I	E	T	L	R	K	.	.	.	.	.	.	.	.	.	F	G	M	K	V	F	Y	G	D	A	T	R	M	D	L	L	E	S	A	G	A	A	K	A	E	V	L	I	N
Query Conservation																								.	.																			.	.	.	.	.	.	.	.	.
Alig confidence																								.	.																			.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.
Template Sequence		K	V	G	V	V	G	T	G	F	V	G	S	T	A	A	F	A	L	V	L	R	G	S	C	S	E	L	V	L	V	D	R	D	E	D	R	A	Q	A	E	A	E	D	I	A	H	A	A	P	V	S	H	G	T	R	V	W	H	G	G	H	.	.	.	.	.	.	.	.	S	E	L	A	D	A	Q	V	V	I	L
Template Known Secondary structure									S														T			S							S	S													T	T			G	G	G									G	.	.	.	.	.	.	.	.	G	G	G	T	T		S
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.									.	.	.	.	.	.	90	.	.	.	.
		470	.	.	.	.	.							.	.					.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.			.	.	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.			.	.	.	.																														.	.												.
Query SS confidence								.	.	.	.	.	.			.	.	.	.																														.	.												.
Query Sequence		A	I	D	D	P	Q	.	.	.	.	.	.	T	N	.	.	.	.	L	Q	L	T	E	M	V	K	E	H	F	P	H	L	Q	I	I	A	R	A	R	D	V	D	H	Y	I	R	L	.	.	R	Q	A	G	V	E	K	P	E	R	E	.	T	F	E	G	A	L	K	T	G	R	L	A	L	E	S	L	G	L	G
Query Conservation								.	.	.	.	.	.			.	.	.	.																														.	.												.
Alig confidence								.	.	.	.	.	.			.	.	.	.																														.	.												.
Template Conservation
Template Sequence		T	A	G	A	E	S	R	L	D	L	L	E	K	N	A	D	I	F	R	E	L	V	P	Q	I	T	R	A	A	P	D	A	V	L	L	V	T	S	N	P	V	D	L	L	T	D	L	A	T	Q	L	A	P	G	Q	P	V	I	G	S	G	T	V	L	D	S	A	R	F	R	H	L	M	A	Q	H	A	G	V	D
Template Known Secondary structure																															T	T	S						S	S	S													T	T	S						T	T																T	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		537	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	H	A
Template Known Secondary structure		G	G	G
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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