Job Description P03819 Confidence 96.46% Date Thu Jan 5 10:58:01 GMT 2012 Rank 174 Aligned Residues 143 % Identity 17% Template c2v65A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase a chain; PDBTitle: apo ldh from the psychrophile c. gunnari Resolution 2.35 Å

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		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440								.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure																																		.	.																		.	.	.	.	.	.	.
Query SS confidence																																		.	.																		.	.	.	.	.	.	.
Query Sequence		A	D	E	I	D	E	E	Q	P	R	V	I	I	A	G	F	G	R	F	G	Q	I	T	G	R	L	L	L	S	S	G	V	.	.	K	M	V	V	L	D	H	D	P	D	H	I	E	T	L	R	K	.	.	.	.	.	.	.	F	G	M	K	V	F	Y	G	D	A	T	R	M	D	L	L	E	S	A	G	A	A
Query Conservation																																		.	.																		.	.	.	.	.	.	.
Alig confidence																																		.	.																		.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.
Template Sequence		K	E	E	P	V	G	S	R	S	K	V	T	V	V	G	V	G	M	V	G	M	A	S	A	I	S	I	L	L	K	D	L	C	D	E	L	A	M	V	D	V	M	E	D	K	L	K	G	E	V	M	D	L	Q	H	G	S	L	F	L	K	T	K	I	V	G	D	K	D	Y	S	V	.	.	.	.	.	.	T	A
Template Known Secondary structure			S						S	S								S													T	T			S							S														T	T	G	G	G			S						S	S	G	G	G	.	.	.	.	.	.	G	T
Template Predicted Secondary structure																																																																										.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.							.	.
		463	.	.	.	.	.	.	470												.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.			.	.	.	510	.				.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.																																					.	.						.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.																																					.	.						.	.	.
Query Sequence		K	A	E	V	L	I	N	A	.	.	.	.	.	.	.	.	.	.	.	I	D	D	P	Q	T	N	L	Q	L	T	E	M	V	K	E	H	F	P	H	L	Q	I	I	A	R	A	R	D	V	D	H	Y	I	R	L	.	.	R	Q	A	G	V	.	.	.	E	K	P	E	R	E	T	F	E	G	A	L	K	T	G
Query Conservation										.	.	.	.	.	.	.	.	.	.	.																																					.	.						.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.																																					.	.						.	.	.
Template Conservation
Template Sequence		N	S	K	V	V	V	V	T	A	G	A	G	E	S	R	L	N	L	V	Q	R	N	V	N	I	F	K	F	I	I	P	N	I	V	K	Y	S	P	N	C	I	L	M	V	V	S	N	P	V	D	I	L	T	Y	V	A	W	K	L	S	G	F	P	R	H	R	V	I	G	S	G	T	N	L	D	S	A	R	F	R
Template Known Secondary structure		T		S																																			T	T							S	S	S											T	T				G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		527	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	L	E	S	L	G	L	G	P	Y	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	I	G	E	K	L	H	L	H	P	S	S	C
Template Known Secondary structure									T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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