Return to main results Retrieve Phyre Job Id

Job DescriptionP03819
Confidence93.81%DateThu Jan 5 10:58:01 GMT 2012
Rank486Aligned Residues44
% Identity27%Templatec2v1dA_
PDB info PDB header:oxidoreductase/repressorChain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: structural basis of lsd1-corest selectivity in histone h32 recognition
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   389390.........400.........410.........420.........430..
Predicted Secondary structure 

















Query SS confidence 











































Query Sequence  AREADEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP
Query Conservation               


 
 
  
  

  
   
    


 
 
Alig confidence 











































Template Conservation             
 






 


 

  
   
  
 



  
Template Sequence  KRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD
Template Known Secondary structure  B
SS


SS

S

STT

SSS
Template Predicted Secondary structure 




















Template SS confidence 











































   268.270.........280.........290.........300.........310.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions