Return to main results Retrieve Phyre Job Id

Job DescriptionP03819
Confidence97.67%DateThu Jan 5 10:58:01 GMT 2012
Rank39Aligned Residues115
% Identity12%Templatec2p4qA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:6-phosphogluconate dehydrogenase, decarboxylating 1; PDBTitle: crystal structure analysis of gnd1 in saccharomyces cerevisiae
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   398.400.........410.........420.........430.........440.... .....450.........460.........470.....
Predicted Secondary structure 














..














Query SS confidence 














































. .






























Query Sequence  EQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMK. . VFYGDATRMDLLESAGAAKAEVLINAIDDPQ
Query Conservation      


 
 
  
  

  
   
    


 
   
      
  ..   


     
  


  
  

 
  
  
Alig confidence 














































..














..













Template Conservation 

  

 



 

  

 

   
  
 



       
   

       
 
  
 
   ..  





 

   
Template Sequence  MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKL. . KRPRKVMLLVKAGA
Template Known Secondary structure 


S

STT


SSSTTTTTSS

SSTS..
SS



SS
Template Predicted Secondary structure 

























..






Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.... .....70........
 
   476...480.........490........ .500.........510....
Predicted Secondary structure 




......




Query SS confidence 






















. . . . . .















Query Sequence  TNLQLTEMVKEHFPHLQIIARAR. . . . . . DVDHYIRLRQAGVEKP
Query Conservation           
   
   




 ......       
   

  
Alig confidence 






















......















Template Conservation   
  

  
   
  
 



 


    
 
 
  
   

 

Template Sequence  PVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFV
Template Known Secondary structure  GGG

TT

S


TT
Template Predicted Secondary structure 












Template SS confidence 












































   7980.........90.........100.........110.........120...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions