Job Description P03819 Confidence 96.62% Date Thu Jan 5 10:58:01 GMT 2012 Rank 161 Aligned Residues 133 % Identity 15% Template c2d4aC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:malate dehydrogenase; PDBTitle: structure of the malate dehydrogenase from aeropyrum pernix Resolution 2.87 Å

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		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440										.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure																								.																		.	.	.	.	.	.	.	.	.																															.
Query SS confidence																								.																		.	.	.	.	.	.	.	.	.																															.
Query Sequence		V	I	I	A	G	F	G	R	F	G	Q	I	T	G	R	L	L	L	S	S	G	V	.	K	M	V	V	L	D	H	D	P	D	H	I	E	T	L	R	K	.	.	.	.	.	.	.	.	.	F	G	M	K	V	F	Y	G	D	A	T	R	M	D	L	L	E	S	A	G	A	A	K	A	E	V	L	I	N	A	.
Query Conservation																								.																		.	.	.	.	.	.	.	.	.																															.
Alig confidence																								.																		.	.	.	.	.	.	.	.	.															.	.	.	.	.	.											.
Template Conservation																																																																	.	.	.	.	.	.
Template Sequence		I	T	I	L	G	A	G	K	V	G	M	A	T	A	V	M	L	M	M	R	G	Y	D	D	L	L	L	I	A	R	T	P	G	K	P	Q	G	E	A	L	D	L	A	H	A	A	A	E	L	G	V	D	I	R	I	S	G	S	N	S	Y	E	D	.	.	.	.	.	.	M	R	G	S	D	I	V	L	V	T	A
Template Known Secondary structure								S														T		S							S	S	T	T																	T									S		G	G	G	.	.	.	.	.	.	G	T	T		S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.
								471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.					.	.	.	.	.	.	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																	.	.	.	.																.
Query SS confidence		.	.	.	.	.	.																																	.	.	.	.																.
Query Sequence		.	.	.	.	.	.	I	D	D	P	Q	T	N	L	Q	L	T	E	M	V	K	E	H	F	P	H	L	Q	I	I	A	R	A	R	D	V	D	H	.	.	.	.	Y	I	R	L	R	Q	A	G	V	E	K	P	E	R	E	.	T	F	E	G	A	L	K	T	G	R	L	A	L	E	S	L	G	L	G	P	Y	E
Query Conservation		.	.	.	.	.	.																																	.	.	.	.																.
Alig confidence		.	.	.	.	.	.																																	.	.	.	.																.
Template Conservation
Template Sequence		G	I	G	R	K	L	E	A	N	A	N	T	M	A	D	L	A	E	K	I	K	A	Y	A	K	D	A	I	V	V	I	T	T	N	P	V	D	A	M	T	Y	V	M	Y	K	K	T	G	F	P	R	E	R	V	I	G	F	S	G	I	L	D	S	A	R	M	A	Y	Y	I	S	Q	K	L	G	V	S	F	K	S
Template Known Secondary structure								T	T																	T	T	S							S	S													T			G	G	G																						T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		540
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		164

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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