Job Description P03819 Confidence 95.16% Date Thu Jan 5 10:58:01 GMT 2012 Rank 328 Aligned Residues 180 % Identity 15% Template c1v9lA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: l-glutamate dehydrogenase from pyrobaculum islandicum2 complexed with nad Resolution 2.80 Å

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		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430												.	.	.	.	.	.	.	.	.	440	.											.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	E	Q	P	R	V	I	I	A	G	F	G	R	F	G	Q	I	T	G	R	L	L	L	S	S	G	V	K	M	V	V	L	D	H	.	.	.	.	.	.	.	.	.	.	.	D	P	D	H	I	E	T	L	R	K	F	.	.	.	.	.	.	.	.	.	.	G	M	K	V	F	Y	G	D	A	T	R	M	D
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	E	G	K	T	V	A	I	Q	G	M	G	N	V	G	R	W	T	A	Y	W	L	E	K	M	G	A	K	V	I	A	V	S	D	I	N	G	V	A	Y	R	K	E	G	L	N	V	E	L	I	Q	K	N	K	G	L	T	G	P	A	L	V	E	L	F	T	T	K	D	N	A	E	F	V	K	N	P	D	A
Template Known Secondary structure				T	T									S												T	T	T									S	S						T	T				T						T	T	T	S												T	S						S	S	T	T	G
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.					500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.																															.
Query SS confidence																																															.	.	.	.																															.
Query Sequence		L	L	E	S	A	G	A	A	K	A	E	V	L	I	N	A	I	D	D	P	Q	T	N	L	Q	L	T	E	M	V	K	E	H	F	P	H	L	Q	I	I	A	R	A	R	D	.	.	.	.	V	D	H	Y	I	R	L	R	Q	A	G	V	E	K	P	E	R	E	T	F	E	G	A	L	K	T	G	R	L	A	.
Query Conservation																																															.	.	.	.																															.
Alig confidence					.	.	.	.																								.	.	.	.	.											.	.	.	.													.																		.
Template Conservation					.	.	.	.																								.	.	.	.	.																											.
Template Sequence		I	F	K	.	.	.	.	L	D	V	D	I	F	V	P	A	A	I	E	N	V	I	R	G	D	N	A	G	L	V	.	.	.	.	.	K	A	R	L	V	V	E	G	A	N	G	P	T	T	P	E	A	E	R	I	L	Y	E	R	G	V	.	V	V	V	P	D	I	L	A	N	A	G	G	V	I	M	S	Y	L
Template Known Secondary structure		G	G	G	.	.	.	.				S						S		S	S		B		T	T	T	T	T	T		.	.	.	.	.			S						S	S	S		B										T	T	T		.									S	T
Template Predicted Secondary structure					.	.	.	.																								.	.	.	.	.																											.
Template SS confidence
		287	.	.					290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.						.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
							530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	L	E	S	L	G	L	G	P	Y	E	A	R	E	R	A	D	V	F	R	R	F	N	I	Q	M	V	E	E	M	A	M	V	E	N	D	T	K	A	R	A	A	V	Y	K	R	T	S	A	M	L	S	E	I	I	T	E
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		E	W	V	E	N	L	Q	W	Y	I	W	D	E	E	E	T	R	K	R	L	E	N	I	M	V	N	N	V	E	R	V	Y	K	R	W	Q	R	E	K	G	W	T	M	R	D	A	A	I	V	T	A	L	E	R	I	Y	N	A	M	K	I
Template Known Secondary structure								T	T																												T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions