Job Description P03819 Confidence 97.06% Date Thu Jan 5 10:58:01 GMT 2012 Rank 105 Aligned Residues 135 % Identity 17% Template c1ur5C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:malate dehydrogenase; PDBTitle: stabilization of a tetrameric malate dehydrogenase by2 introduction of a disulfide bridge at the dimer/dimer3 interface Resolution 1.75 Å

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		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.										.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.																			.	.	.	.	.	.	.	.	.
Query SS confidence																											.																			.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	R	V	I	I	A	G	F	G	R	F	G	Q	I	T	G	R	L	L	L	S	S	G	V	.	K	M	V	V	L	D	H	D	P	D	H	I	E	T	L	R	K	F	.	.	.	.	.	.	.	.	.	G	M	K	V	F	Y	G	D	A	T	R	M	D	L	L	E	S	A	G	A	A	K	A	E	V	L	I
Query Conservation																											.																			.	.	.	.	.	.	.	.	.
Alig confidence																											.																			.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.
Template Sequence		R	K	K	I	S	I	I	G	A	G	F	V	G	S	T	T	A	H	W	L	A	A	K	E	L	G	D	I	V	L	L	D	I	V	E	G	V	P	Q	G	K	A	L	D	L	Y	E	A	S	P	I	E	G	F	D	V	R	V	T	G	T	N	N	Y	A	D	.	.	.	.	.	.	T	A	N	S	D	V	I	V
Template Known Secondary structure											S													T	T		S							S	S	T	T											T	T					T									S		G	G	G	.	.	.	.	.	.	G	T	T		S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.	.
		469	470	.	.	.	.	.	.	.									.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.			.	.	.	510	.			.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.																														.	.						.	.							.
Query SS confidence											.	.	.	.	.	.	.	.																														.	.						.	.							.
Query Sequence		N	A	I	D	D	P	Q	T	N	.	.	.	.	.	.	.	.	L	Q	L	T	E	M	V	K	E	H	F	P	H	L	Q	I	I	A	R	A	R	D	V	D	H	Y	I	R	L	.	.	R	Q	A	G	V	.	.	E	K	P	E	R	E	.	T	F	E	G	A	L	K	T	G	R	L	A	L	E	S	L	G	L
Query Conservation											.	.	.	.	.	.	.	.																														.	.						.	.							.
Alig confidence											.	.	.	.	.	.	.	.																														.	.						.	.							.
Template Conservation
Template Sequence		V	T	S	G	A	R	E	D	L	I	K	V	N	A	D	I	T	R	A	C	I	S	Q	A	A	P	L	S	P	N	A	V	I	I	M	V	N	N	P	L	D	A	M	T	Y	L	A	A	E	V	S	G	F	P	K	E	R	V	I	G	Q	A	G	V	L	D	A	A	R	Y	R	T	F	I	A	M	E	A	G	V
Template Known Secondary structure																										G	G	G		T	T								S	S																G	G	G					S																	T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		536	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	Y	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	E	D
Template Known Secondary structure			G	G	G
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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