Return to main results Retrieve Phyre Job Id

Job DescriptionP03819
Confidence94.76%DateThu Jan 5 10:58:01 GMT 2012
Rank382Aligned Residues72
% Identity18%Templatec1nytC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: shikimate dehydrogenase aroe complexed with nadp+
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   395....400.........410.........420.........430.........440 .........450.........460.........470.
Predicted Secondary structure 














...















Query SS confidence 













































. . .






























Query Sequence  IDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK. . . FGMKVFYGDATRMDLLESAGAAKAEVLINAI
Query Conservation         


 
 
  
  

  
   
    


 
   
     ... 
     


     
  


  
  

 
 
Alig confidence 













































...













......










Template Conservation       
 


 








   
   
  
 
 

   

  

                  ......    






Template Sequence  FIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELE. . . . . . GHEFDLIINAT
Template Known Secondary structure 


TT


STT

SSTTTTS

TGGGT......T


S
S
Template Predicted Secondary structure 





















......






Template SS confidence 















































































   115....120.........130.........140.........150.........160.........170....... ..180........
 
   472
Predicted Secondary structure 
Query SS confidence 
Query Sequence  D
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  S
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 
   189
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions