Job Description P03819 Confidence 96.31% Date Thu Jan 5 10:58:01 GMT 2012 Rank 196 Aligned Residues 136 % Identity 13% Template c1lldA_ PDB info PDB header:oxidoreductase(choh (d)-nad (a)) Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: molecular basis of allosteric activation of bacterial l-lactate2 dehydrogenase Resolution 2.00 Å

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		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440									.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.																		.	.	.	.	.	.	.	.
Query SS confidence																											.	.																		.	.	.	.	.	.	.	.
Query Sequence		Q	P	R	V	I	I	A	G	F	G	R	F	G	Q	I	T	G	R	L	L	L	S	S	G	V	.	.	K	M	V	V	L	D	H	D	P	D	H	I	E	T	L	R	K	.	.	.	.	.	.	.	.	F	G	M	K	V	F	Y	G	D	A	T	R	M	D	L	L	E	S	A	G	A	A	K	A	E	V	L	I
Query Conservation																											.	.																		.	.	.	.	.	.	.	.
Alig confidence																											.	.																		.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.
Template Sequence		P	T	K	L	A	V	I	G	A	G	A	V	G	S	T	L	A	F	A	A	A	Q	R	G	I	A	R	E	I	V	L	E	D	I	A	K	E	R	V	E	A	E	V	L	D	M	Q	H	G	S	S	F	Y	P	T	V	S	I	D	G	S	D	D	P	E	I	.	.	.	.	.	.	C	R	D	A	D	M	V	V
Template Known Secondary structure											S													T	T			S							S	S														T	G	G	G	S	T	T							S		G	G	G	.	.	.	.	.	.	G	T	T		S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.							.	.	.	.	.	.	.	80
		469	470	.	.	.	.	.	.	.																.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.			.	500	.	.	.	.	.	.	.	.	.	510	.				.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.														.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.														.	.	.
Query Sequence		N	A	I	D	D	P	Q	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	L	T	E	M	V	K	E	H	F	P	H	L	Q	I	I	A	R	A	R	.	.	D	V	D	H	Y	I	R	L	R	Q	A	G	V	.	.	.	E	K	P	E	R	E	T	F	E	G	A	L	K	T	G	R	L
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.														.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.														.	.	.
Template Conservation
Template Sequence		I	T	A	G	P	R	Q	K	P	G	Q	S	R	L	E	L	V	G	A	T	V	N	I	L	K	A	I	M	P	N	L	V	K	V	A	P	N	A	I	Y	M	L	I	T	N	P	V	D	I	A	T	H	V	A	Q	K	L	T	G	L	P	E	N	Q	I	F	G	S	G	T	N	L	D	S	A	R	L	R	F	L
Template Known Secondary structure										T	T																										T	T	S							S	S													T			T	T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		529	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	S	L	G	L	G	P	Y	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	Q	Q	T	G	V	N	V	K	N	V
Template Known Secondary structure							T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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